The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides46258 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46259 | SERINE/THREONINE-PROTEIN KINASE |
Paelopatides46260 | PROTEIN CBG26694 |
Paelopatides46261 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides46262 | PROTEIN CBG26694 |
Paelopatides46263 | CYTOKINE RECEPTOR |
Paelopatides46264 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides46265 | CYTOCHROME P450 FAMILY 4 |
Paelopatides46266 | |
Paelopatides46267 | |
Paelopatides46268 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides46269 | N-LYSINE METHYLTRANSFERASE KMT5A |
Paelopatides46270 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides46271 | |
Paelopatides46272 | MIP08469P |
Paelopatides46274 | |
Paelopatides46275 | |
Paelopatides46276 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides46277 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides46278 | SR-RELATED CTD ASSOCIATED FACTOR 6 |
Paelopatides46279 | UNCHARACTERIZED |
Paelopatides46280 | |
Paelopatides46281 | |
Paelopatides46282 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN |
Paelopatides46283 | NEUROBLAST DIFFERENTIATION-ASSOCIATED PROTEIN AHNAK-LIKE PROTEIN |
Paelopatides46284 | |
Paelopatides46285 | ADENOSINE KINASE |
Paelopatides46286 | BUCENTAUR RELATED |
Paelopatides46287 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46288 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides46289 | |
Paelopatides46290 | SUGAR KINASE |
Paelopatides46291 | SUGAR KINASE |
Paelopatides46292 | XPA-BINDING PROTEIN 1-RELATED |
Paelopatides46293 | NUCLEAR SPECKLE SPLICING REGULATORY PROTEIN 1 |
Paelopatides46294 | - |
Paelopatides46295 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides46296 | |
Paelopatides46297 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides46298 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides46299 | |
Paelopatides46300 | |
Paelopatides46301 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides46302 | |
Paelopatides46303 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
Paelopatides46304 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
Paelopatides46305 | - |
Paelopatides46306 | - |
Paelopatides46307 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides46308 | SRCR DOMAIN-CONTAINING PROTEIN |