About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46414
Paelopatides46415
Paelopatides46416EXS-RELATED PROTEIN
Paelopatides46417
Paelopatides46418PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides46419NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides46420NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides46421AGAP005574-PA
Paelopatides464224.1 G PROTEIN
Paelopatides46423ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46424
Paelopatides46425ENDONUCLEASE-RELATED
Paelopatides46426POL PROTEIN
Paelopatides46427
Paelopatides46428
Paelopatides46429EXPRESSED PROTEIN
Paelopatides46430
Paelopatides46431RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
Paelopatides46432
Paelopatides46433
Paelopatides46434SI:CH211-196P9.1-RELATED
Paelopatides46435CATION TRANSPORTING ATPASE
Paelopatides46436REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46437REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46438
Paelopatides46439REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46440MITOCHONDRIAL RIBOSOMAL PROTEIN 63
Paelopatides46441
Paelopatides46442
Paelopatides46443
Paelopatides46444PROTEIN CBG26694
Paelopatides46445
Paelopatides46446PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46447N-LYSINE METHYLTRANSFERASE KMT5A
Paelopatides46448
Paelopatides46449
Paelopatides46450ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides46451BUCENTAUR RELATED
Paelopatides46452
Paelopatides46453ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46454-
Paelopatides46455-
Paelopatides46456FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46457CELL DIVISION PROTEIN KINASE
Paelopatides46458
Paelopatides46459INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN
Paelopatides46460REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46461CYTOCHROME P450 508A4-RELATED
Paelopatides46462
Paelopatides46463
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