The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides46719 | CASEIN KINASE-RELATED |
Paelopatides46720 | RIBOSOMAL PROTEIN S7 |
Paelopatides46721 | UNCHARACTERIZED |
Paelopatides46722 | ENDONUCLEASE-RELATED |
Paelopatides46723 | BONUS, ISOFORM C-RELATED |
Paelopatides46724 | |
Paelopatides46725 | |
Paelopatides46726 | REVERSE TRANSCRIPTASE |
Paelopatides46728 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B |
Paelopatides46729 | |
Paelopatides46730 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
Paelopatides46731 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46732 | LEUCOKININ RECEPTOR-RELATED |
Paelopatides46733 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46734 | |
Paelopatides46735 | |
Paelopatides46736 | |
Paelopatides46737 | LEUCINE RICH REPEAT FAMILY PROTEIN |
Paelopatides46738 | |
Paelopatides46739 | |
Paelopatides46740 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides46741 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
Paelopatides46742 | ZGC:195170 |
Paelopatides46743 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46744 | |
Paelopatides46745 | |
Paelopatides46746 | GAMMA TUBULIN COMPLEX PROTEIN |
Paelopatides46747 | BONUS, ISOFORM C-RELATED |
Paelopatides46748 | METHIONYL-TRNA SYNTHETASE |
Paelopatides46749 | 20 KD NUCLEAR CAP BINDING PROTEIN |
Paelopatides46750 | |
Paelopatides46751 | NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1 |
Paelopatides46752 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
Paelopatides46753 | EGALITARIAN, ISOFORM B |
Paelopatides46754 | |
Paelopatides46755 | BICAUDAL D FAMILY MEMBER |
Paelopatides46756 | BICAUDAL D FAMILY MEMBER |
Paelopatides46757 | |
Paelopatides46758 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides46759 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides46760 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides46761 | PROTEIN CBG26694 |
Paelopatides46762 | BAND 7 PROTEIN-RELATED |
Paelopatides46763 | LIPASE |
Paelopatides46764 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
Paelopatides46765 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46766 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides46767 | PROTEIN CBG23806 |
Paelopatides46768 | |
Paelopatides46769 |