About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46719CASEIN KINASE-RELATED
Paelopatides46720RIBOSOMAL PROTEIN S7
Paelopatides46721UNCHARACTERIZED
Paelopatides46722ENDONUCLEASE-RELATED
Paelopatides46723BONUS, ISOFORM C-RELATED
Paelopatides46724
Paelopatides46725
Paelopatides46726REVERSE TRANSCRIPTASE
Paelopatides46728TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B
Paelopatides46729
Paelopatides46730SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Paelopatides46731REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46732LEUCOKININ RECEPTOR-RELATED
Paelopatides46733REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46734
Paelopatides46735
Paelopatides46736
Paelopatides46737LEUCINE RICH REPEAT FAMILY PROTEIN
Paelopatides46738
Paelopatides46739
Paelopatides46740G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides46741ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS
Paelopatides46742ZGC:195170
Paelopatides46743REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides46744
Paelopatides46745
Paelopatides46746GAMMA TUBULIN COMPLEX PROTEIN
Paelopatides46747BONUS, ISOFORM C-RELATED
Paelopatides46748METHIONYL-TRNA SYNTHETASE
Paelopatides4674920 KD NUCLEAR CAP BINDING PROTEIN
Paelopatides46750
Paelopatides46751NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1
Paelopatides46752SCAVENGER RECEPTOR DOMAIN-CONTAINING
Paelopatides46753EGALITARIAN, ISOFORM B
Paelopatides46754
Paelopatides46755BICAUDAL D FAMILY MEMBER
Paelopatides46756BICAUDAL D FAMILY MEMBER
Paelopatides46757
Paelopatides46758MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides46759FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46760FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides46761PROTEIN CBG26694
Paelopatides46762BAND 7 PROTEIN-RELATED
Paelopatides46763LIPASE
Paelopatides46764HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
Paelopatides46765ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46766NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides46767PROTEIN CBG23806
Paelopatides46768
Paelopatides46769
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