The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides46880 | NETRIN RECEPTOR UNC5 |
Paelopatides46885 | ENDONUCLEASE |
Paelopatides46886 | |
Paelopatides46887 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
Paelopatides46888 | |
Paelopatides46889 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
Paelopatides46890 | REVERSE TRANSCRIPTASE |
Paelopatides46891 | DEOXYRIBONUCLEASE II |
Paelopatides46892 | DEOXYRIBONUCLEASE II |
Paelopatides46893 | CDC73 DOMAIN PROTEIN |
Paelopatides46894 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides46895 | CDC73 DOMAIN PROTEIN |
Paelopatides46896 | |
Paelopatides46897 | GLYCOGEN SYNTHASE |
Paelopatides46898 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides46899 | BUCENTAUR RELATED |
Paelopatides46900 | |
Paelopatides46901 | ANDROGLOBIN |
Paelopatides46902 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46903 | |
Paelopatides46904 | 60S RIBOSOMAL PROTEIN L38 |
Paelopatides46905 | 60S RIBOSOMAL PROTEIN L38 |
Paelopatides46906 | |
Paelopatides46907 | RNA AND EXPORT FACTOR BINDING PROTEIN |
Paelopatides46908 | |
Paelopatides46909 | E3 UBIQUITIN-PROTEIN LIGASE CHIP |
Paelopatides46910 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
Paelopatides46911 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides46912 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
Paelopatides46913 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides46914 | ENDONUCLEASE-RELATED |
Paelopatides46915 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides46916 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides46917 | ENDONUCLEASE-RELATED |
Paelopatides46918 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides46919 | ENDONUCLEASE-RELATED |
Paelopatides46920 | |
Paelopatides46921 | |
Paelopatides46922 | RNA 2',3'-CYCLIC PHOSPHODIESTERASE |
Paelopatides46923 | APRATAXIN-RELATED |
Paelopatides46924 | |
Paelopatides46925 | UPF0573 PROTEIN C2ORF70 |
Paelopatides46926 | ADP-RIBOSYL CYCLASE |
Paelopatides46927 | TRANSPOSASE, PUTATIVE-RELATED |
Paelopatides46928 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46929 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46930 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides46931 | - |
Paelopatides46932 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides46933 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |