About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides46880NETRIN RECEPTOR UNC5
Paelopatides46885ENDONUCLEASE
Paelopatides46886
Paelopatides46887CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides46888
Paelopatides46889CYSTEINE-RICH MOTOR NEURON 1 PROTEIN
Paelopatides46890REVERSE TRANSCRIPTASE
Paelopatides46891DEOXYRIBONUCLEASE II
Paelopatides46892DEOXYRIBONUCLEASE II
Paelopatides46893CDC73 DOMAIN PROTEIN
Paelopatides46894HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides46895CDC73 DOMAIN PROTEIN
Paelopatides46896
Paelopatides46897GLYCOGEN SYNTHASE
Paelopatides46898SUSHI DOMAIN-CONTAINING PROTEIN 1
Paelopatides46899BUCENTAUR RELATED
Paelopatides46900
Paelopatides46901ANDROGLOBIN
Paelopatides46902PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides46903
Paelopatides4690460S RIBOSOMAL PROTEIN L38
Paelopatides4690560S RIBOSOMAL PROTEIN L38
Paelopatides46906
Paelopatides46907RNA AND EXPORT FACTOR BINDING PROTEIN
Paelopatides46908
Paelopatides46909E3 UBIQUITIN-PROTEIN LIGASE CHIP
Paelopatides46910RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
Paelopatides46911ENZYMATIC POLYPROTEIN-RELATED
Paelopatides46912GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
Paelopatides46913TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides46914ENDONUCLEASE-RELATED
Paelopatides46915TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides46916ENZYMATIC POLYPROTEIN-RELATED
Paelopatides46917ENDONUCLEASE-RELATED
Paelopatides46918ENZYMATIC POLYPROTEIN-RELATED
Paelopatides46919ENDONUCLEASE-RELATED
Paelopatides46920
Paelopatides46921
Paelopatides46922RNA 2',3'-CYCLIC PHOSPHODIESTERASE
Paelopatides46923APRATAXIN-RELATED
Paelopatides46924
Paelopatides46925UPF0573 PROTEIN C2ORF70
Paelopatides46926ADP-RIBOSYL CYCLASE
Paelopatides46927TRANSPOSASE, PUTATIVE-RELATED
Paelopatides46928ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46929ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides46930ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides46931-
Paelopatides46932F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides46933CXC DOMAIN-CONTAINING PROTEIN-RELATED
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