The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides47034 | |
| Paelopatides47035 | 6-PHOSPHOGLUCONATE DEHYDROGENASE |
| Paelopatides47036 | |
| Paelopatides47037 | |
| Paelopatides47038 | ACTIN-BINDING LIM PROTEIN |
| Paelopatides47039 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47040 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides47041 | ASHWIN |
| Paelopatides47042 | |
| Paelopatides47043 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| Paelopatides47044 | DDB1- AND CUL4-ASSOCIATED FACTOR 17 |
| Paelopatides47046 | NETRIN RECEPTOR UNC5 |
| Paelopatides47047 | |
| Paelopatides47048 | RETROTRANSPOSON |
| Paelopatides47049 | RETROTRANSPOSON |
| Paelopatides47050 | RETROTRANSPOSON |
| Paelopatides47051 | |
| Paelopatides47052 | |
| Paelopatides47053 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| Paelopatides47054 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
| Paelopatides47055 | GRB2-ASSOCIATED-BINDING PROTEIN |
| Paelopatides47056 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides47057 | SOLUTE CARRIER FAMILY 13 MEMBER |
| Paelopatides47058 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47059 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47060 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47061 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN |
| Paelopatides47062 | |
| Paelopatides47063 | |
| Paelopatides47064 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47065 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47066 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| Paelopatides47067 | PROTEIN, PUTATIVE-RELATED |
| Paelopatides47068 | SI:CH211-262H13.3-RELATED-RELATED |
| Paelopatides47069 | |
| Paelopatides47070 | CELL DIVISION PROTEIN KINASE |
| Paelopatides47071 | |
| Paelopatides47072 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| Paelopatides47073 | PROTEIN CBG26694 |
| Paelopatides47074 | |
| Paelopatides47075 | |
| Paelopatides47076 | CHROMOSOME 20 ORF85 FAMILY MEMBER |
| Paelopatides47077 | V-TYPE PROTON ATPASE SUBUNIT H |
| Paelopatides47078 | |
| Paelopatides47079 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47080 | PROTEIN CBG26694 |
| Paelopatides47081 | PROTEIN CBG26694 |
| Paelopatides47082 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides47083 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides47084 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
