The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides46617 | DOLICHYL GLYCOSYLTRANSFERASE |
| Paelopatides46618 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides46619 | |
| Paelopatides46620 | |
| Paelopatides46621 | POL PROTEIN |
| Paelopatides46622 | |
| Paelopatides46623 | |
| Paelopatides46624 | ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides46625 | PROTEIN CBG26694 |
| Paelopatides46626 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides46627 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides46628 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides46629 | PROTEIN CBG26694 |
| Paelopatides46630 | PROTEIN CBG26694 |
| Paelopatides46631 | REVERSE TRANSCRIPTASES |
| Paelopatides46632 | |
| Paelopatides46633 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46634 | REVERSE TRANSCRIPTASES |
| Paelopatides46635 | |
| Paelopatides46637 | |
| Paelopatides46638 | MUCIN 4-RELATED |
| Paelopatides46639 | |
| Paelopatides46640 | |
| Paelopatides46641 | |
| Paelopatides46642 | |
| Paelopatides46643 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46644 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides46645 | PROTEIN CBG26694 |
| Paelopatides46646 | PROTEIN CBG26694 |
| Paelopatides46647 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides46649 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides46650 | CHROMO DOMAIN-CONTAINING PROTEIN LHP1 |
| Paelopatides46651 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides46652 | CASPASE-ACTIVATED DNASE |
| Paelopatides46653 | |
| Paelopatides46654 | |
| Paelopatides46655 | G-PROTEIN COUPLED RECEPTOR |
| Paelopatides46656 | LD33804P |
| Paelopatides46657 | |
| Paelopatides46658 | KELCH PROTEIN |
| Paelopatides46659 | SERINE/THREONINE-PROTEIN KINASE ATM |
| Paelopatides46660 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides46661 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| Paelopatides46662 | |
| Paelopatides46663 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG |
| Paelopatides46664 | |
| Paelopatides46665 | |
| Paelopatides46666 | |
| Paelopatides46667 | |
| Paelopatides46668 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
