The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides47285 | PROTEIN CBG26694 |
| Paelopatides47286 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Paelopatides47287 | NETRIN RECEPTOR UNC5 |
| Paelopatides47288 | ENDONUCLEASE |
| Paelopatides47289 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
| Paelopatides47290 | BICD FAMILY-LIKE CARGO ADAPTER |
| Paelopatides47291 | |
| Paelopatides47292 | |
| Paelopatides47293 | |
| Paelopatides47294 | |
| Paelopatides47295 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides47296 | |
| Paelopatides47297 | |
| Paelopatides47298 | UPF0472 PROTEIN C16ORF72 |
| Paelopatides47299 | |
| Paelopatides47300 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides47301 | DUF914-RELATED |
| Paelopatides47302 | |
| Paelopatides47303 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| Paelopatides47304 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides47305 | EXPRESSED PROTEIN |
| Paelopatides47306 | EXPRESSED PROTEIN |
| Paelopatides47307 | |
| Paelopatides47310 | |
| Paelopatides47311 | |
| Paelopatides47312 | TUMOR NECROSIS FACTOR INDUCED PROTEIN |
| Paelopatides47313 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| Paelopatides47314 | UNCHARACTERIZED |
| Paelopatides47315 | |
| Paelopatides47316 | ZGC:195170 |
| Paelopatides47317 | |
| Paelopatides47318 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides47319 | METABOTROPIC GLUTAMATE RECEPTOR |
| Paelopatides47320 | FERROCHELATASE |
| Paelopatides47321 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides47322 | |
| Paelopatides47323 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47324 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides47325 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides47326 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47327 | |
| Paelopatides47328 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides47329 | OS05G0310600 PROTEIN |
| Paelopatides47330 | |
| Paelopatides47331 | NATTERIN-4 |
| Paelopatides47332 | |
| Paelopatides47333 | TRANSCOBALAMIN-1/GASTRIC INTRINSIC FACTOR |
| Paelopatides47334 | RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL |
| Paelopatides47335 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| Paelopatides47336 | DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 1 |
