The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides47391 | PEPTIDASE S8 |
Paelopatides47392 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47393 | |
Paelopatides47394 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides47395 | G-PROTEIN COUPLED RECEPTOR |
Paelopatides47396 | - |
Paelopatides47397 | 5-HYDROXYTRYPTAMINE RECEPTOR |
Paelopatides47398 | REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 |
Paelopatides47399 | |
Paelopatides47400 | POL PROTEIN |
Paelopatides47401 | |
Paelopatides47402 | |
Paelopatides47403 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides47404 | PROTEIN CBG26694 |
Paelopatides47405 | |
Paelopatides47406 | |
Paelopatides47409 | CENTROSOMAL PROTEIN OF 41 KDA |
Paelopatides47411 | UNCHARACTERIZED |
Paelopatides47412 | TRANSPOSON |
Paelopatides47413 | |
Paelopatides47414 | ENDONUCLEASE-RELATED |
Paelopatides47415 | |
Paelopatides47416 | |
Paelopatides47417 | |
Paelopatides47418 | TRANSPOSON |
Paelopatides47419 | |
Paelopatides47420 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides47421 | - |
Paelopatides47422 | UBIQUITIN-ACTIVATING ENZYME E1 |
Paelopatides47423 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides47424 | |
Paelopatides47425 | PRA1 PROTEIN |
Paelopatides47426 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47427 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides47428 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Paelopatides47429 | NICOLIN 1 |
Paelopatides47430 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Paelopatides47431 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
Paelopatides47433 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides47434 | GABA-B RECEPTOR |
Paelopatides47435 | GABA-B RECEPTOR |
Paelopatides47436 | GABA-B RECEPTOR |
Paelopatides47437 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
Paelopatides47438 | |
Paelopatides47439 | G DOMAIN-CONTAINING PROTEIN |
Paelopatides47440 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
Paelopatides47441 | CYTOCHROME P450 508A4-RELATED |
Paelopatides47442 | PROTEIN CBG26694 |
Paelopatides47443 | EXPRESSED PROTEIN |
Paelopatides47444 |