About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides47391PEPTIDASE S8
Paelopatides47392REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47393
Paelopatides47394MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides47395G-PROTEIN COUPLED RECEPTOR
Paelopatides47396-
Paelopatides473975-HYDROXYTRYPTAMINE RECEPTOR
Paelopatides47398REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1
Paelopatides47399
Paelopatides47400POL PROTEIN
Paelopatides47401
Paelopatides47402
Paelopatides47403TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides47404PROTEIN CBG26694
Paelopatides47405
Paelopatides47406
Paelopatides47409CENTROSOMAL PROTEIN OF 41 KDA
Paelopatides47411UNCHARACTERIZED
Paelopatides47412TRANSPOSON
Paelopatides47413
Paelopatides47414ENDONUCLEASE-RELATED
Paelopatides47415
Paelopatides47416
Paelopatides47417
Paelopatides47418TRANSPOSON
Paelopatides47419
Paelopatides4742052 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides47421-
Paelopatides47422UBIQUITIN-ACTIVATING ENZYME E1
Paelopatides47423OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides47424
Paelopatides47425PRA1 PROTEIN
Paelopatides47426PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides47427REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides47428MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides47429NICOLIN 1
Paelopatides47430AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides47431AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides47433F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides47434GABA-B RECEPTOR
Paelopatides47435GABA-B RECEPTOR
Paelopatides47436GABA-B RECEPTOR
Paelopatides47437DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED
Paelopatides47438
Paelopatides47439G DOMAIN-CONTAINING PROTEIN
Paelopatides47440STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides47441CYTOCHROME P450 508A4-RELATED
Paelopatides47442PROTEIN CBG26694
Paelopatides47443EXPRESSED PROTEIN
Paelopatides47444
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