The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides47863 | |
| Paelopatides47864 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| Paelopatides47865 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides47866 | PROTEIN CBG26694 |
| Paelopatides47867 | PROTEIN CBG26694 |
| Paelopatides47868 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides47869 | |
| Paelopatides47870 | |
| Paelopatides47871 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| Paelopatides47872 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47873 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides47874 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47875 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47876 | |
| Paelopatides47877 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47878 | |
| Paelopatides47879 | |
| Paelopatides47880 | |
| Paelopatides47881 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides47882 | ANDROGEN-INDUCED PROTEIN 1-RELATED |
| Paelopatides47883 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
| Paelopatides47884 | ANDROGEN-INDUCED PROTEIN 1-RELATED |
| Paelopatides47886 | |
| Paelopatides47887 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| Paelopatides47888 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides47889 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| Paelopatides47890 | MAINTENANCE OF TELOMOERE CAPPING |
| Paelopatides47891 | MAINTENANCE OF TELOMOERE CAPPING |
| Paelopatides47892 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides47893 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides47894 | INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER |
| Paelopatides47895 | NUDIX HYDROLASE |
| Paelopatides47896 | NUCLEAR HORMONE RECEPTOR |
| Paelopatides47897 | - |
| Paelopatides47898 | |
| Paelopatides47899 | |
| Paelopatides47900 | MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS |
| Paelopatides47901 | CENTROSOMAL PROTEIN 2 |
| Paelopatides47902 | |
| Paelopatides47903 | |
| Paelopatides47904 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides47905 | |
| Paelopatides47906 | |
| Paelopatides47907 | EXPRESSED PROTEIN |
| Paelopatides47908 | IQ DOMAIN-CONTAINING PROTEIN H |
| Paelopatides47909 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides47910 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides47911 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides47912 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47913 | REVERSE TRANSCRIPTASES |
