The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides47966 | |
| Paelopatides47967 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47968 | DEHYDROGENASES, SHORT CHAIN |
| Paelopatides47969 | PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 2-RELATED |
| Paelopatides47970 | POL PROTEIN |
| Paelopatides47971 | |
| Paelopatides47972 | EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER |
| Paelopatides47973 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| Paelopatides47974 | TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED |
| Paelopatides47975 | PROPERDIN |
| Paelopatides47976 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides47977 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides47978 | |
| Paelopatides47979 | CYSTEINE-RICH MOTOR NEURON 1 PROTEIN |
| Paelopatides47982 | |
| Paelopatides47983 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| Paelopatides47984 | |
| Paelopatides47985 | |
| Paelopatides47986 | FIBROSIN FAMILY MEMBER |
| Paelopatides47987 | |
| Paelopatides47988 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides47989 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides47990 | PROTEIN CBG16428 |
| Paelopatides47991 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides47992 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides47993 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| Paelopatides47994 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| Paelopatides47995 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| Paelopatides47996 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| Paelopatides47997 | DIHYDROPTERIDINE REDUCTASE |
| Paelopatides47998 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides47999 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides48000 | |
| Paelopatides48001 | BOLA TRANSCRIPTION REGULATOR |
| Paelopatides48002 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| Paelopatides48003 | |
| Paelopatides48004 | PROTEIN CBG20215-RELATED |
| Paelopatides48005 | 40S RIBOSOMAL PROTEIN S24 |
| Paelopatides48006 | UBIQUITIN SPECIFIC PROTEINASE |
| Paelopatides48007 | |
| Paelopatides48008 | |
| Paelopatides48009 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| Paelopatides48010 | CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE |
| Paelopatides48011 | |
| Paelopatides48012 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48013 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48014 | ENDONUCLEASE-RELATED |
| Paelopatides48015 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48016 | |
| Paelopatides48017 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
