The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48068 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| Paelopatides48069 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides48070 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48071 | C5ORF31 |
| Paelopatides48072 | FORKHEAD BOX PROTEIN |
| Paelopatides48073 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| Paelopatides48074 | S-ANTIGEN PROTEIN |
| Paelopatides48075 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| Paelopatides48076 | NON-SPECIFIC LETHAL 1, ISOFORM M |
| Paelopatides48077 | |
| Paelopatides48078 | ASPARTATE AMINOTRANSFERASE |
| Paelopatides48079 | PROTEIN CBG26694 |
| Paelopatides48080 | |
| Paelopatides48081 | ASPARTATE AMINOTRANSFERASE |
| Paelopatides48082 | |
| Paelopatides48083 | EXPRESSED PROTEIN |
| Paelopatides48084 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides48085 | |
| Paelopatides48086 | |
| Paelopatides48093 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides48094 | ATP-DEPENDENT RNA HELICASE |
| Paelopatides48095 | DNAJ HOMOLOG SUBFAMILY C MEMBER 4 |
| Paelopatides48096 | |
| Paelopatides48097 | UNCHARACTERIZED |
| Paelopatides48098 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED |
| Paelopatides48099 | BTB/POZ DOMAIN-CONTAINING |
| Paelopatides48100 | |
| Paelopatides48101 | |
| Paelopatides48102 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED |
| Paelopatides48103 | TRANSCRIPTION INITIATION FACTOR IIB-RELATED |
| Paelopatides48104 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48105 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides48106 | ISLET CELL AUTOANTIGEN 1 |
| Paelopatides48107 | |
| Paelopatides48108 | |
| Paelopatides48109 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| Paelopatides48110 | PROTEIN CBG26694 |
| Paelopatides48111 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48112 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48113 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides48114 | POL PROTEIN |
| Paelopatides48115 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides48116 | OS05G0310600 PROTEIN |
| Paelopatides48118 | |
| Paelopatides48119 | |
| Paelopatides48120 | |
| Paelopatides48121 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48122 | PROTEIN CBG26694 |
| Paelopatides48123 | CRUMBS FAMILY MEMBER |
| Paelopatides48124 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
