About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48485OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides48486OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides48487
Paelopatides48488CXC2 DOMAIN-CONTAINING PROTEIN
Paelopatides48489
Paelopatides48490
Paelopatides48491LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71
Paelopatides48492WSCD FAMILY MEMBER CG9164
Paelopatides48493PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides48494PROTEIN, PUTATIVE-RELATED
Paelopatides48495PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides48496PROTEIN CBG24663
Paelopatides48497CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47
Paelopatides48498CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47
Paelopatides48499
Paelopatides48500
Paelopatides48501
Paelopatides48502COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides48503L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides48504DYNEIN LIGHT CHAIN
Paelopatides48505GLYCOSIDASE FAMILY 31
Paelopatides48506MITOGEN-ACTIVATED PROTEIN KINASE
Paelopatides48507
Paelopatides48508REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48509
Paelopatides48510PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides48511
Paelopatides48512PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides48513GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN
Paelopatides48514
Paelopatides48515REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48516ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48517TETRATRICOPEPTIDE REPEAT PROTEIN 32
Paelopatides48518-
Paelopatides48519TRANSLATIONAL ACTIVATOR GCN1-RELATED
Paelopatides48520TRANSLATIONAL ACTIVATOR GCN1-RELATED
Paelopatides48522CENTROMERE PROTEIN E
Paelopatides48523GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48524GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48525GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48526
Paelopatides48527GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides48528
Paelopatides48529ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48530ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides48531
Paelopatides48532REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48533
Paelopatides48534VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides48535FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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