The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides48435 | GLYCOSYLTRANSFERASE |
Paelopatides48436 | ZINC FINGER PROTEIN |
Paelopatides48437 | SENTRIN/SUMO-SPECIFIC PROTEASE |
Paelopatides48438 | |
Paelopatides48439 | |
Paelopatides48440 | CYCLIN-DEPENDENT KINASE 2-INTERACTING PROTEIN |
Paelopatides48441 | |
Paelopatides48442 | |
Paelopatides48443 | REVERSE TRANSCRIPTASES |
Paelopatides48444 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides48445 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides48446 | RIBOFLAVIN TRANSPORTER RIBJ |
Paelopatides48447 | |
Paelopatides48448 | FI04643P-RELATED |
Paelopatides48449 | |
Paelopatides48450 | |
Paelopatides48451 | NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED |
Paelopatides48452 | THIOREDOXIN-LIKE PROTEN 4A, 4B |
Paelopatides48453 | |
Paelopatides48454 | TRANSMEMBRANE PROTEIN 246 |
Paelopatides48455 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Paelopatides48456 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48457 | BUCENTAUR RELATED |
Paelopatides48458 | |
Paelopatides48459 | |
Paelopatides48460 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides48461 | REVERSE TRANSCRIPTASES |
Paelopatides48462 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides48463 | |
Paelopatides48464 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides48465 | |
Paelopatides48466 | |
Paelopatides48467 | AGAP008228-PA |
Paelopatides48468 | |
Paelopatides48469 | |
Paelopatides48470 | CENTROSOMAL PROTEIN 2 |
Paelopatides48471 | |
Paelopatides48472 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48473 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
Paelopatides48474 | |
Paelopatides48475 | |
Paelopatides48476 | |
Paelopatides48477 | |
Paelopatides48478 | |
Paelopatides48479 | KAZRIN-RELATED |
Paelopatides48480 | CYTOCHROME P450 26 |
Paelopatides48481 | SI:CH73-250A16.5-RELATED |
Paelopatides48482 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides48483 | |
Paelopatides48484 | OLIGORIBONUCLEASE, MITOCHONDRIAL |