About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48435GLYCOSYLTRANSFERASE
Paelopatides48436ZINC FINGER PROTEIN
Paelopatides48437SENTRIN/SUMO-SPECIFIC PROTEASE
Paelopatides48438
Paelopatides48439
Paelopatides48440CYCLIN-DEPENDENT KINASE 2-INTERACTING PROTEIN
Paelopatides48441
Paelopatides48442
Paelopatides48443REVERSE TRANSCRIPTASES
Paelopatides48444SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides48445L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides48446RIBOFLAVIN TRANSPORTER RIBJ
Paelopatides48447
Paelopatides48448FI04643P-RELATED
Paelopatides48449
Paelopatides48450
Paelopatides48451NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED
Paelopatides48452THIOREDOXIN-LIKE PROTEN 4A, 4B
Paelopatides48453
Paelopatides48454TRANSMEMBRANE PROTEIN 246
Paelopatides48455DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Paelopatides48456REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48457BUCENTAUR RELATED
Paelopatides48458
Paelopatides48459
Paelopatides48460TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides48461REVERSE TRANSCRIPTASES
Paelopatides48462NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides48463
Paelopatides48464NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides48465
Paelopatides48466
Paelopatides48467AGAP008228-PA
Paelopatides48468
Paelopatides48469
Paelopatides48470CENTROSOMAL PROTEIN 2
Paelopatides48471
Paelopatides48472REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides48473PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Paelopatides48474
Paelopatides48475
Paelopatides48476
Paelopatides48477
Paelopatides48478
Paelopatides48479KAZRIN-RELATED
Paelopatides48480CYTOCHROME P450 26
Paelopatides48481SI:CH73-250A16.5-RELATED
Paelopatides48482MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides48483
Paelopatides48484OLIGORIBONUCLEASE, MITOCHONDRIAL
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