The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48718 | |
| Paelopatides48719 | |
| Paelopatides48720 | PROTEIN CBG26694 |
| Paelopatides48721 | |
| Paelopatides48722 | |
| Paelopatides48723 | |
| Paelopatides48724 | NEUROTRANSMITTER GATED ION CHANNEL |
| Paelopatides48726 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides48727 | DNA REPAIR-SCAFFOLDING PROTEIN SPIDR |
| Paelopatides48728 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
| Paelopatides48729 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
| Paelopatides48730 | POL PROTEIN |
| Paelopatides48731 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| Paelopatides48732 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48733 | |
| Paelopatides48734 | EXPRESSED PROTEIN |
| Paelopatides48735 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| Paelopatides48736 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48737 | |
| Paelopatides48738 | DENTIN SIALOPHOSPHOPROTEIN |
| Paelopatides48739 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides48740 | NG5 |
| Paelopatides48741 | |
| Paelopatides48742 | |
| Paelopatides48743 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 |
| Paelopatides48744 | |
| Paelopatides48745 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides48746 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides48747 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides48748 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides48749 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides48750 | UNCHARACTERIZED |
| Paelopatides48751 | |
| Paelopatides48752 | |
| Paelopatides48753 | |
| Paelopatides48754 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| Paelopatides48755 | PROTEIN CBG26694 |
| Paelopatides48756 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides48757 | UNCHARACTERIZED |
| Paelopatides48758 | INTIMAL THICKNESS RECEPTOR-RELATED |
| Paelopatides48759 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48760 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48761 | - |
| Paelopatides48762 | |
| Paelopatides48763 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48764 | |
| Paelopatides48765 | SI:CH211-196P9.1-RELATED |
| Paelopatides48766 | |
| Paelopatides48767 | NETRIN RECEPTOR UNC5 |
| Paelopatides48779 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
