The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides48780 | NEUROBLASTOMA-AMPLIFIED SEQUENCE |
| Paelopatides48781 | MATING RESPONSE PROTEIN POI2 |
| Paelopatides48782 | |
| Paelopatides48783 | METHYLTRANSFERASE-RELATED |
| Paelopatides48784 | PEROXISOMAL SARCOSINE OXIDASE |
| Paelopatides48785 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48786 | ASTEROID PROTEIN |
| Paelopatides48787 | ASTEROID PROTEIN |
| Paelopatides48788 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48789 | |
| Paelopatides48790 | |
| Paelopatides48791 | |
| Paelopatides48792 | |
| Paelopatides48793 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
| Paelopatides48794 | |
| Paelopatides48796 | |
| Paelopatides48797 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| Paelopatides48798 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides48799 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides48800 | |
| Paelopatides48801 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48802 | |
| Paelopatides48803 | |
| Paelopatides48804 | PROTEIN CBG26694 |
| Paelopatides48805 | |
| Paelopatides48806 | 5'-NUCLEOTIDASE-RELATED |
| Paelopatides48807 | |
| Paelopatides48808 | |
| Paelopatides48809 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides48810 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides48811 | |
| Paelopatides48812 | EXPRESSED PROTEIN |
| Paelopatides48813 | CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2 |
| Paelopatides48814 | CRUMBS FAMILY MEMBER |
| Paelopatides48815 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides48816 | |
| Paelopatides48817 | PROTEIN CBG26694 |
| Paelopatides48818 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides48819 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides48820 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides48821 | ALPHA-GLUCOSIDASE |
| Paelopatides48822 | PROTEIN CBG26694 |
| Paelopatides48823 | ALPHA-GLUCOSIDASE |
| Paelopatides48824 | |
| Paelopatides48825 | |
| Paelopatides48826 | |
| Paelopatides48827 | |
| Paelopatides48828 | |
| Paelopatides48829 | PROTEIN CBG26694 |
| Paelopatides48830 | ENDONUCLEASE-RELATED |
