The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides48937 | RNA BINDING PROTEIN |
Paelopatides48938 | RNA BINDING PROTEIN |
Paelopatides48939 | |
Paelopatides48940 | PROTEIN CBG26694 |
Paelopatides48941 | PROTEIN CBG26694 |
Paelopatides48942 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides48943 | AGAP008810-PA |
Paelopatides48944 | ZINC FINGER PROTEIN |
Paelopatides48945 | UNCHARACTERIZED |
Paelopatides48946 | ENDONUCLEASE-RELATED |
Paelopatides48947 | LD33695P |
Paelopatides48948 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48949 | LD33695P |
Paelopatides48950 | |
Paelopatides48951 | AMINE OXIDASE |
Paelopatides48952 | AMINE OXIDASE |
Paelopatides48953 | |
Paelopatides48954 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides48955 | PROTEIN CBG26694 |
Paelopatides48956 | PROTEIN CBG26694 |
Paelopatides48957 | OBG GTPASE FAMILY |
Paelopatides48958 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48959 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Paelopatides48960 | DNA PRIMASE SMALL SUBUNIT |
Paelopatides48961 | DNA PRIMASE SMALL SUBUNIT |
Paelopatides48962 | |
Paelopatides48963 | |
Paelopatides48964 | PROTEIN PHOSPHATASE 2C |
Paelopatides48965 | - |
Paelopatides48966 | EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN |
Paelopatides48967 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED |
Paelopatides48968 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48969 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides48970 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE |
Paelopatides48971 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE |
Paelopatides48972 | OPSIN |
Paelopatides48973 | OPSIN |
Paelopatides48974 | OPSIN |
Paelopatides48975 | OPSIN |
Paelopatides48976 | OPSIN |
Paelopatides48977 | 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE |
Paelopatides48978 | ZINC FINGER PROTEIN |
Paelopatides48979 | |
Paelopatides48980 | GLUTATHIONE REDUCTASE |
Paelopatides48981 | GLUTATHIONE REDUCTASE |
Paelopatides48982 | GLUTAREDOXIN 2 |
Paelopatides48983 | |
Paelopatides48984 | DNA POLYMERASE |
Paelopatides48985 | |
Paelopatides48986 |