About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides48987
Paelopatides48988RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Paelopatides48989INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Paelopatides48990COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides48991MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Paelopatides48992
Paelopatides48993EPM2A-INTERACTING PROTEIN 1
Paelopatides48994HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides48995E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER
Paelopatides48996
Paelopatides48997
Paelopatides48998NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides48999RIBOSOMAL PROTEIN L2
Paelopatides49000UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49
Paelopatides49001
Paelopatides49002PROTEIN CBG26694
Paelopatides49003ENDONUCLEASE-RELATED
Paelopatides49004POL PROTEIN
Paelopatides49005HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Paelopatides49006RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides49007
Paelopatides49008REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49009RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides49010RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides49011DOUBLECORTIN DOMAIN CONTAINING 2
Paelopatides49012CONDENSIN-2 COMPLEX SUBUNIT H2
Paelopatides49013
Paelopatides49014ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49015SUPPRESSOR OF VARIEGATION 4-20-RELATED
Paelopatides49016MALONYL-COA ACP TRANSACYLASE, ACP-BINDING
Paelopatides49017ENDONUCLEASE-RELATED
Paelopatides49018MALONYL-COA ACP TRANSACYLASE, ACP-BINDING
Paelopatides49019ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49020
Paelopatides49021
Paelopatides49022UNCHARACTERIZED
Paelopatides49023CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49024CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49025
Paelopatides49026
Paelopatides49027DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides49028
Paelopatides49029PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides49030FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49031B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides49032ANKYRIN REPEAT AND MYND DOMAIN-CONTAINING PROTEIN 2
Paelopatides49033
Paelopatides49034NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides49035
Paelopatides49036REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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