About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49037POL PROTEIN
Paelopatides49038
Paelopatides49039
Paelopatides49040CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides49041
Paelopatides49042REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49043
Paelopatides49044NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides49045
Paelopatides49046ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides49047ATP-BINDING CASSETTE SUB-FAMILY C
Paelopatides49048SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides49049
Paelopatides49050MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides49051
Paelopatides49052SODIUM/NUCLEOSIDE COTRANSPORTER
Paelopatides49053ORGANIC ANION TRANSPORTER
Paelopatides49054PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides49055DNA HELICASE RECQ FAMILY MEMBER
Paelopatides49056DNA HELICASE RECQ FAMILY MEMBER
Paelopatides49057L-GULONOLACTONE OXIDASE
Paelopatides49058SODIUM-BILE ACID COTRANSPORTER
Paelopatides49059CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49060CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49061
Paelopatides49062
Paelopatides49063CARBOHYDRATE SULFOTRANSFERASE
Paelopatides49064NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides49065SEPTIN
Paelopatides49066BARDET-BIEDL SYNDROME 7 PROTEIN
Paelopatides49067BARDET-BIEDL SYNDROME 7 PROTEIN
Paelopatides49068NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1
Paelopatides49069
Paelopatides49070
Paelopatides49071
Paelopatides49072FI01459P
Paelopatides49073AAA-FAMILY ATPASE
Paelopatides49074UNCHARACTERIZED
Paelopatides49075CADHERIN-87A
Paelopatides49077CADHERIN-87A
Paelopatides49078CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT
Paelopatides49079GEM-ASSOCIATED PROTEIN 8
Paelopatides49080UNCHARACTERIZED
Paelopatides49081MUCIN 4-RELATED
Paelopatides49082ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides49083
Paelopatides49084GAG-RELATED PROTEIN
Paelopatides49085
Paelopatides49086MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides49087PHD-TYPE DOMAIN-CONTAINING PROTEIN
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