About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49188JTB PROTEIN-RELATED
Paelopatides49189REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED
Paelopatides49190REVERSE TRANSCRIPTASES
Paelopatides49191
Paelopatides49192REVERSE TRANSCRIPTASES
Paelopatides49193
Paelopatides49194REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED
Paelopatides49195
Paelopatides49196EXS-RELATED PROTEIN
Paelopatides49197
Paelopatides49198PROTEIN, PUTATIVE-RELATED
Paelopatides49199FORMIN-J
Paelopatides49200PR DOMAIN ZINC FINGER PROTEIN
Paelopatides49203REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49204FI04643P-RELATED
Paelopatides49205ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49206
Paelopatides49207
Paelopatides49208
Paelopatides49209
Paelopatides49210
Paelopatides49211
Paelopatides49212
Paelopatides49213XANTHINE DEHYDROGENASE
Paelopatides49214
Paelopatides49215UBIQUILIN
Paelopatides49216TRANSPOSABLE ELEMENT-RELATED
Paelopatides49217ALPHA-MANNOSIDASE 2C1
Paelopatides49218ALPHA-MANNOSIDASE 2C1
Paelopatides49219DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
Paelopatides49220
Paelopatides49221PROTEIN PM1
Paelopatides49222AMINE OXIDASE
Paelopatides49223
Paelopatides49224FK506-BINDING PROTEIN 15
Paelopatides49225FK506-BINDING PROTEIN 15
Paelopatides49226PR DOMAIN ZINC FINGER PROTEIN
Paelopatides49227PROTEIN CBG23806
Paelopatides49228TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Paelopatides49229SLIT-ROBO RHO GTPASE ACTIVATING PROTEIN
Paelopatides49230
Paelopatides49231
Paelopatides49232ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides49233CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE
Paelopatides49234
Paelopatides4923560S RIBOSOMAL PROTEIN L37
Paelopatides49236ATP SYNTHASE DELTA/EPSILON CHAIN
Paelopatides49237CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED
Paelopatides49238
Paelopatides49239GLUTATHIONE PEROXIDASE
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