The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides49188 | JTB PROTEIN-RELATED |
Paelopatides49189 | REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED |
Paelopatides49190 | REVERSE TRANSCRIPTASES |
Paelopatides49191 | |
Paelopatides49192 | REVERSE TRANSCRIPTASES |
Paelopatides49193 | |
Paelopatides49194 | REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED |
Paelopatides49195 | |
Paelopatides49196 | EXS-RELATED PROTEIN |
Paelopatides49197 | |
Paelopatides49198 | PROTEIN, PUTATIVE-RELATED |
Paelopatides49199 | FORMIN-J |
Paelopatides49200 | PR DOMAIN ZINC FINGER PROTEIN |
Paelopatides49203 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49204 | FI04643P-RELATED |
Paelopatides49205 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49206 | |
Paelopatides49207 | |
Paelopatides49208 | |
Paelopatides49209 | |
Paelopatides49210 | |
Paelopatides49211 | |
Paelopatides49212 | |
Paelopatides49213 | XANTHINE DEHYDROGENASE |
Paelopatides49214 | |
Paelopatides49215 | UBIQUILIN |
Paelopatides49216 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides49217 | ALPHA-MANNOSIDASE 2C1 |
Paelopatides49218 | ALPHA-MANNOSIDASE 2C1 |
Paelopatides49219 | DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE |
Paelopatides49220 | |
Paelopatides49221 | PROTEIN PM1 |
Paelopatides49222 | AMINE OXIDASE |
Paelopatides49223 | |
Paelopatides49224 | FK506-BINDING PROTEIN 15 |
Paelopatides49225 | FK506-BINDING PROTEIN 15 |
Paelopatides49226 | PR DOMAIN ZINC FINGER PROTEIN |
Paelopatides49227 | PROTEIN CBG23806 |
Paelopatides49228 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
Paelopatides49229 | SLIT-ROBO RHO GTPASE ACTIVATING PROTEIN |
Paelopatides49230 | |
Paelopatides49231 | |
Paelopatides49232 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49233 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
Paelopatides49234 | |
Paelopatides49235 | 60S RIBOSOMAL PROTEIN L37 |
Paelopatides49236 | ATP SYNTHASE DELTA/EPSILON CHAIN |
Paelopatides49237 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
Paelopatides49238 | |
Paelopatides49239 | GLUTATHIONE PEROXIDASE |