About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49348CALPAIN
Paelopatides49349CALPAIN
Paelopatides49350
Paelopatides49351
Paelopatides49352REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49353
Paelopatides49354PROTEIN BUD31-RELATED
Paelopatides49355UNCHARACTERIZED
Paelopatides49356ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides49357BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Paelopatides49358PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides49359CYTOCHROME P450 508A4-RELATED
Paelopatides49360ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49361REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49362REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49363PROTEIN CBG26694
Paelopatides49364
Paelopatides49365BUCENTAUR RELATED
Paelopatides49366CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49367
Paelopatides49368PROTEIN CBG26694
Paelopatides49369T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Paelopatides49370
Paelopatides49371ZINC FINGER AND SCAN DOMAIN-CONTAINING
Paelopatides49372FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49373FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49374
Paelopatides49375FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49376
Paelopatides49377TRAF AND TNF RECEPTOR-ASSOCIATED PROTEIN
Paelopatides49378INTIMAL THICKNESS RECEPTOR-RELATED
Paelopatides49379
Paelopatides49380DYNEIN ASSEMBLY FACTOR 3, AXONEMAL
Paelopatides49381
Paelopatides49382SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Paelopatides49383
Paelopatides49384
Paelopatides49385PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides49386ATP-BINDING CASSETTE SUB-FAMILY B
Paelopatides493875'-NUCLEOTIDASE-RELATED
Paelopatides49388
Paelopatides49389PROTEIN CBG23806
Paelopatides49391PROTEIN CBG26694
Paelopatides49392THAP DOMAIN PROTEIN
Paelopatides49393PROTEIN CBG26694
Paelopatides49394POL PROTEIN
Paelopatides49395FI04487P
Paelopatides49396HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides49397FI04487P
Paelopatides49398
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