The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides49399 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides49400 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49401 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| Paelopatides49402 | |
| Paelopatides49403 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides49404 | OVOCHYMASE-RELATED |
| Paelopatides49405 | OVOCHYMASE-RELATED |
| Paelopatides49406 | OVOCHYMASE-RELATED |
| Paelopatides49407 | NEUROTRANSMITTER GATED ION CHANNEL |
| Paelopatides49408 | |
| Paelopatides49409 | SIDESTEP PROTEIN |
| Paelopatides49411 | |
| Paelopatides49412 | |
| Paelopatides49413 | - |
| Paelopatides49414 | TARSH-RELATED FIBRONECTIN DOMAIN-CONTAINING |
| Paelopatides49415 | FUMARATE HYDRATASE-RELATED |
| Paelopatides49416 | UNCHARACTERIZED |
| Paelopatides49417 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| Paelopatides49418 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides49419 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49420 | UNCHARACTERIZED |
| Paelopatides49421 | ANTIGEN 332, DBL-LIKE PROTEIN-RELATED |
| Paelopatides49422 | |
| Paelopatides49423 | POL PROTEIN |
| Paelopatides49424 | |
| Paelopatides49425 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides49426 | |
| Paelopatides49427 | |
| Paelopatides49428 | |
| Paelopatides49429 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides49430 | |
| Paelopatides49431 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides49432 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49433 | IP13529P |
| Paelopatides49434 | SI:CH211-196P9.1-RELATED |
| Paelopatides49435 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides49439 | |
| Paelopatides49440 | FLAP ENDONUCLEASE FAMILY MEMBER |
| Paelopatides49441 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49442 | TRAFFICKING KINESIN-BINDING PROTEIN |
| Paelopatides49443 | TRAFFICKING KINESIN-BINDING PROTEIN |
| Paelopatides49444 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49445 | |
| Paelopatides49446 | |
| Paelopatides49447 | ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4 |
| Paelopatides49448 | WD REPEAT-CONTAINING PROTEIN 97 |
| Paelopatides49449 | - |
| Paelopatides49450 | |
| Paelopatides49451 | PHOSPHATIDYLSERINE DECARBOXYLASE |
| Paelopatides49452 | PHOSPHATIDYLSERINE DECARBOXYLASE |
