The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides49505 | F-BOX ONLY PROTEIN 33 |
| Paelopatides49506 | UNCHARACTERIZED |
| Paelopatides49507 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49508 | |
| Paelopatides49509 | RETROTRANSPOSON |
| Paelopatides49510 | PROTEIN CBG26694 |
| Paelopatides49511 | |
| Paelopatides49512 | |
| Paelopatides49513 | PROTEIN TFG |
| Paelopatides49514 | |
| Paelopatides49515 | |
| Paelopatides49516 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
| Paelopatides49519 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides49520 | HEMOPEXIN DOMAIN-CONTAINING PROTEIN |
| Paelopatides49521 | |
| Paelopatides49522 | |
| Paelopatides49523 | |
| Paelopatides49524 | |
| Paelopatides49525 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides49526 | |
| Paelopatides49527 | |
| Paelopatides49528 | |
| Paelopatides49529 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49530 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
| Paelopatides49531 | SEPIAPTERIN REDUCTASE |
| Paelopatides49532 | |
| Paelopatides49533 | |
| Paelopatides49534 | FTP DOMAIN-CONTAINING PROTEIN |
| Paelopatides49535 | |
| Paelopatides49536 | PEPTIDASE S8 |
| Paelopatides49537 | T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN |
| Paelopatides49538 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| Paelopatides49539 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| Paelopatides49541 | |
| Paelopatides49542 | |
| Paelopatides49543 | ACETYLCHOLINESTERASE |
| Paelopatides49544 | |
| Paelopatides49545 | |
| Paelopatides49546 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49547 | HIGH MOBILITY GROUP PROTEIN 2 |
| Paelopatides49548 | |
| Paelopatides49549 | PROTEIN CBG26694 |
| Paelopatides49550 | RETROTRANSPOSON |
| Paelopatides49551 | GTP-BINDING |
| Paelopatides49552 | |
| Paelopatides49553 | |
| Paelopatides49554 | |
| Paelopatides49555 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides49556 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides49557 |
