About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49558
Paelopatides49559RETROTRANSPOSON
Paelopatides49560RETROTRANSPOSON
Paelopatides49561RETROTRANSPOSON
Paelopatides49562PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides49563
Paelopatides49564
Paelopatides49565
Paelopatides49566INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides49567
Paelopatides49568NETRIN RECEPTOR UNC5
Paelopatides49569
Paelopatides49570
Paelopatides49575G PROTEIN-COUPLED RECEPTOR 157-RELATED
Paelopatides49576
Paelopatides49577ACYL-COA SYNTHETASE
Paelopatides49578
Paelopatides49579NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides49580CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49581
Paelopatides49582ACROSIN-RELATED
Paelopatides49583
Paelopatides49584ANKYRIN REPEAT CONTAINING
Paelopatides49585OS01G0621700 PROTEIN
Paelopatides49586MYOSIN
Paelopatides49587MYOSIN
Paelopatides49588REVERSE TRANSCRIPTASE
Paelopatides49589
Paelopatides49592FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49593FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49594RETROTRANSPOSON
Paelopatides49595
Paelopatides49596FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides49597REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49600HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
Paelopatides49601LEUCINE RICH REPEAT PROTEIN
Paelopatides49602INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49603TRANSPOSASE, PUTATIVE-RELATED
Paelopatides49604S-ANTIGEN PROTEIN
Paelopatides49605
Paelopatides49606PROTEIN EVA-1
Paelopatides49607
Paelopatides49608CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49609CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49610
Paelopatides49611L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides49612
Paelopatides49613
Paelopatides49614CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49615CXC DOMAIN-CONTAINING PROTEIN-RELATED
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