The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides49616 | CRUMBS FAMILY MEMBER |
| Paelopatides49617 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49618 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49619 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides49620 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| Paelopatides49621 | |
| Paelopatides49623 | AMMONIUM TRANSPORTER |
| Paelopatides49624 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49625 | |
| Paelopatides49626 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
| Paelopatides49627 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49628 | ACTIN |
| Paelopatides49629 | |
| Paelopatides49630 | |
| Paelopatides49634 | |
| Paelopatides49635 | |
| Paelopatides49636 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED |
| Paelopatides49637 | CARNITINE O-ACYLTRANSFERASE |
| Paelopatides49638 | |
| Paelopatides49639 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides49640 | ORF PROTEIN |
| Paelopatides49641 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides49643 | |
| Paelopatides49644 | |
| Paelopatides49645 | NAD KINASE |
| Paelopatides49647 | PROTEIN CBG26694 |
| Paelopatides49649 | |
| Paelopatides49650 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides49651 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49652 | POL PROTEIN |
| Paelopatides49653 | |
| Paelopatides49654 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| Paelopatides49655 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides49656 | |
| Paelopatides49657 | THIOESTERASE SUPERFAMILY MEMBER-RELATED |
| Paelopatides49658 | FI04643P-RELATED |
| Paelopatides49659 | CRUMBS FAMILY MEMBER |
| Paelopatides49660 | |
| Paelopatides49661 | |
| Paelopatides49662 | |
| Paelopatides49663 | ACYL-COA SYNTHETASE |
| Paelopatides49665 | GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1 |
| Paelopatides49666 | |
| Paelopatides49667 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| Paelopatides49668 | MYOGENIC FACTOR |
| Paelopatides49669 | NERVE GROWTH FACTOR NGF -RELATED |
| Paelopatides49670 | PROTEIN CBG26694 |
| Paelopatides49671 | GAG-RELATED PROTEIN |
| Paelopatides49672 | |
| Paelopatides49673 |
