About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49775MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides49776INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN
Paelopatides49777
Paelopatides49778
Paelopatides49779SI:CH211-108C17.2-RELATED-RELATED
Paelopatides49780SIDEROFLEXIN
Paelopatides49781
Paelopatides49782SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D
Paelopatides49783CYCLINS
Paelopatides49784
Paelopatides49785ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49786PEPTIDASE
Paelopatides49787SHOOTIN-1
Paelopatides49788
Paelopatides49789UNCHARACTERIZED
Paelopatides49790
Paelopatides49791
Paelopatides49792-
Paelopatides49793UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX ASSEMBLY FACTOR 1 FAMILY MEMBER
Paelopatides49794
Paelopatides49795SUPERNUMERARY LIMBS, ISOFORM B-RELATED
Paelopatides49796
Paelopatides49797IG-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides49798
Paelopatides49799NEUROMODULIN
Paelopatides49800REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49801EGALITARIAN, ISOFORM B
Paelopatides49802
Paelopatides49805
Paelopatides49806
Paelopatides49807EPM2A-INTERACTING PROTEIN 1
Paelopatides49808EPM2A-INTERACTING PROTEIN 1
Paelopatides49809ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49810
Paelopatides49811
Paelopatides49812ENDONUCLEASE-RELATED
Paelopatides49813
Paelopatides49814
Paelopatides49815
Paelopatides49816CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides49817
Paelopatides49818
Paelopatides49819
Paelopatides49821
Paelopatides49822
Paelopatides49823MONOCARBOXYLATE TRANSPORTER
Paelopatides49824DRAB5-RELATED
Paelopatides49825-
Paelopatides49826
Paelopatides49827ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1
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