About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides49828ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49829ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides49830ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1
Paelopatides49831
Paelopatides49832GTP-BINDING PROTEIN ALPHA SUBUNIT
Paelopatides49833PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR
Paelopatides49834AXIN
Paelopatides49835
Paelopatides49836TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides49838TYROSINE-PROTEIN PHOSPHATASE CORKSCREW
Paelopatides49839
Paelopatides49840NETRIN RECEPTOR UNC5
Paelopatides49842EF-HAND DOMAIN-CONTAINING PROTEIN
Paelopatides49843NUCLEOTIDE KINASE
Paelopatides49844GPI-ANCHOR TRANSAMIDASE
Paelopatides49845-
Paelopatides49846
Paelopatides49847CARNITINE O-ACYLTRANSFERASE
Paelopatides49848
Paelopatides49849
Paelopatides49850PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1
Paelopatides49851QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1
Paelopatides49852REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides49853BUCENTAUR RELATED
Paelopatides49854TYROSINE-PROTEIN KINASE
Paelopatides49855EPM2A-INTERACTING PROTEIN 1
Paelopatides49856TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides49857
Paelopatides49858
Paelopatides49859CASEIN KINASE II SUBUNIT BETA
Paelopatides49860
Paelopatides49861PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Paelopatides49862GH3 DOMAIN-CONTAINING PROTEIN
Paelopatides49863
Paelopatides49864MICROSOMAL GLUTATHIONE S-TRANSFERASE 1
Paelopatides49865THROMBOSPONDIN
Paelopatides49866PROPERDIN
Paelopatides49868ENDONUCLEASE-RELATED
Paelopatides49869
Paelopatides49870
Paelopatides49875PROTEIN CBG26694
Paelopatides49876
Paelopatides49877
Paelopatides49878
Paelopatides49879
Paelopatides49880
Paelopatides49881THAP DOMAIN PROTEIN
Paelopatides49882
Paelopatides49883EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT
Paelopatides49884EGALITARIAN, ISOFORM B
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