The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides49828 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49829 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49830 | ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides49831 | |
Paelopatides49832 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
Paelopatides49833 | PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR |
Paelopatides49834 | AXIN |
Paelopatides49835 | |
Paelopatides49836 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides49838 | TYROSINE-PROTEIN PHOSPHATASE CORKSCREW |
Paelopatides49839 | |
Paelopatides49840 | NETRIN RECEPTOR UNC5 |
Paelopatides49842 | EF-HAND DOMAIN-CONTAINING PROTEIN |
Paelopatides49843 | NUCLEOTIDE KINASE |
Paelopatides49844 | GPI-ANCHOR TRANSAMIDASE |
Paelopatides49845 | - |
Paelopatides49846 | |
Paelopatides49847 | CARNITINE O-ACYLTRANSFERASE |
Paelopatides49848 | |
Paelopatides49849 | |
Paelopatides49850 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
Paelopatides49851 | QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 |
Paelopatides49852 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides49853 | BUCENTAUR RELATED |
Paelopatides49854 | TYROSINE-PROTEIN KINASE |
Paelopatides49855 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides49856 | TYROSINE-PROTEIN KINASE RECEPTOR |
Paelopatides49857 | |
Paelopatides49858 | |
Paelopatides49859 | CASEIN KINASE II SUBUNIT BETA |
Paelopatides49860 | |
Paelopatides49861 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
Paelopatides49862 | GH3 DOMAIN-CONTAINING PROTEIN |
Paelopatides49863 | |
Paelopatides49864 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
Paelopatides49865 | THROMBOSPONDIN |
Paelopatides49866 | PROPERDIN |
Paelopatides49868 | ENDONUCLEASE-RELATED |
Paelopatides49869 | |
Paelopatides49870 | |
Paelopatides49875 | PROTEIN CBG26694 |
Paelopatides49876 | |
Paelopatides49877 | |
Paelopatides49878 | |
Paelopatides49879 | |
Paelopatides49880 | |
Paelopatides49881 | THAP DOMAIN PROTEIN |
Paelopatides49882 | |
Paelopatides49883 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT |
Paelopatides49884 | EGALITARIAN, ISOFORM B |