The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides49240 | TRANSPOSON |
| Paelopatides49241 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN |
| Paelopatides49242 | |
| Paelopatides49243 | |
| Paelopatides49244 | |
| Paelopatides49245 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides49246 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides49247 | BONUS, ISOFORM C-RELATED |
| Paelopatides49248 | |
| Paelopatides49249 | |
| Paelopatides49250 | |
| Paelopatides49251 | |
| Paelopatides49252 | |
| Paelopatides49253 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49254 | |
| Paelopatides49255 | |
| Paelopatides49256 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides49260 | |
| Paelopatides49261 | IMPORTIN BETA |
| Paelopatides49262 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| Paelopatides49263 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| Paelopatides49264 | |
| Paelopatides49265 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides49266 | |
| Paelopatides49267 | VILLIN |
| Paelopatides49268 | |
| Paelopatides49269 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| Paelopatides49270 | NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN |
| Paelopatides49271 | NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN |
| Paelopatides49272 | |
| Paelopatides49273 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides49274 | HEPARAN SULFATE SULFOTRANSFERASE |
| Paelopatides49275 | CELL DIVISION CYCLE 16,23,27 |
| Paelopatides49276 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49277 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49278 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides49279 | |
| Paelopatides49280 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49281 | |
| Paelopatides49282 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides49284 | |
| Paelopatides49286 | MULTI-COPPER OXIDASE |
| Paelopatides49287 | |
| Paelopatides49288 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides49289 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides49290 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides49291 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| Paelopatides49292 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| Paelopatides49293 | |
| Paelopatides49294 |
