The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50253 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50254 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides50255 | POL PROTEIN |
Paelopatides50256 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50257 | |
Paelopatides50258 | |
Paelopatides50259 | |
Paelopatides50260 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides50261 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50262 | UNCHARACTERIZED |
Paelopatides50263 | PROTEIN CBG26694 |
Paelopatides50264 | |
Paelopatides50265 | TETRASPANIN |
Paelopatides50266 | EXPRESSED PROTEIN |
Paelopatides50267 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides50268 | DNAJ HOMOLOG SUBFAMILY C MEMBER 30, MITOCHONDRIAL |
Paelopatides50269 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides50270 | AGAP008170-PA |
Paelopatides50271 | BUCENTAUR RELATED |
Paelopatides50272 | |
Paelopatides50273 | MULTICOPPER OXIDASE-RELATED |
Paelopatides50274 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50275 | |
Paelopatides50276 | |
Paelopatides50277 | LARVAL STORAGE PROTEIN/PHENOLOXIDASE |
Paelopatides50278 | LARVAL STORAGE PROTEIN/PHENOLOXIDASE |
Paelopatides50279 | |
Paelopatides50280 | |
Paelopatides50281 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
Paelopatides50283 | MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F |
Paelopatides50284 | CUB DOMAIN-CONTAINING PROTEIN |
Paelopatides50285 | NEUROTRANSMITTER GATED ION CHANNEL |
Paelopatides50286 | ZINC FINGER PROTEIN |
Paelopatides50287 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50288 | NXPE FAMILY MEMBER |
Paelopatides50289 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
Paelopatides50290 | |
Paelopatides50291 | |
Paelopatides50292 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50293 | |
Paelopatides50294 | ADIPOGENESIS REGULATORY FACTOR |
Paelopatides50295 | |
Paelopatides50296 | |
Paelopatides50297 | AAA-FAMILY ATPASE |
Paelopatides50298 | AAA-FAMILY ATPASE |
Paelopatides50299 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides50300 | OPSIN |
Paelopatides50301 | UNCHARACTERIZED |
Paelopatides50302 | CYCLINS |
Paelopatides50303 | PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT |