The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides50147 | |
| Paelopatides50148 | |
| Paelopatides50149 | |
| Paelopatides50150 | |
| Paelopatides50151 | |
| Paelopatides50152 | |
| Paelopatides50153 | |
| Paelopatides50154 | |
| Paelopatides50155 | |
| Paelopatides50156 | PHOSPHATE TRANSPORTER |
| Paelopatides50157 | |
| Paelopatides50158 | UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN |
| Paelopatides50159 | AGAP002036-PA |
| Paelopatides50160 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides50161 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 |
| Paelopatides50162 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50163 | GABA-B RECEPTOR |
| Paelopatides50164 | GALECTIN |
| Paelopatides50165 | GALECTIN |
| Paelopatides50166 | CELL DIVISION CYCLE ASSOCIATED PROTEIN 4/SERTA DOMAIN-CONTAINING PROTEIN 2 |
| Paelopatides50167 | |
| Paelopatides50168 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| Paelopatides50169 | PROTEIN CBG26694 |
| Paelopatides50170 | PROTEIN CBG26694 |
| Paelopatides50171 | POL PROTEIN |
| Paelopatides50172 | IRE1-RELATED |
| Paelopatides50173 | |
| Paelopatides50174 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides50177 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| Paelopatides50178 | |
| Paelopatides50179 | |
| Paelopatides50180 | |
| Paelopatides50181 | |
| Paelopatides50182 | |
| Paelopatides50183 | |
| Paelopatides50184 | SHISA |
| Paelopatides50185 | |
| Paelopatides50186 | SLR1189 PROTEIN |
| Paelopatides50189 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| Paelopatides50190 | REVERSE TRANSCRIPTASES |
| Paelopatides50191 | BUCENTAUR RELATED |
| Paelopatides50192 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50193 | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC |
| Paelopatides50194 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides50195 | |
| Paelopatides50196 | SI:CH211-108C17.2-RELATED-RELATED |
| Paelopatides50197 | AGAP005574-PA |
| Paelopatides50198 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
| Paelopatides50199 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50200 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
