About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides50201VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Paelopatides50202
Paelopatides50203
Paelopatides50204TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 1
Paelopatides50206
Paelopatides50208APOLIPOPROTEIN L
Paelopatides50209PROTEIN CBG26694
Paelopatides50210SI:CH211-108C17.2-RELATED-RELATED
Paelopatides50211ZGC:195170
Paelopatides50212
Paelopatides50213REVERSE TRANSCRIPTASES
Paelopatides50214METHYLTHIOADENOSINE/PURINE NUCLEOSIDE PHOSPHORYLASE
Paelopatides50215DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides50216
Paelopatides50217D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Paelopatides50218TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN
Paelopatides50219TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN
Paelopatides50220PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN
Paelopatides50221T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL
Paelopatides50222
Paelopatides50223PROTEIN CBG26694
Paelopatides50224PROTEIN CBG26694
Paelopatides50225SYNAPTIC ADHESION-LIKE MOLECULE SALM
Paelopatides50226ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides50227DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Paelopatides50228CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50229ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50230ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides50231
Paelopatides50232
Paelopatides50233B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides50234
Paelopatides50235TRANSCRIPTION TERMINATION FACTOR 2-RELATED
Paelopatides50236TRANSCRIPTION TERMINATION FACTOR 2-RELATED
Paelopatides50237
Paelopatides50238CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50239AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Paelopatides50240ARYLSULFATASE
Paelopatides50241
Paelopatides50242
Paelopatides50243
Paelopatides50244GAG-RELATED PROTEIN
Paelopatides50245REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50246MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Paelopatides50247CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides50248
Paelopatides50249ENZYMATIC POLYPROTEIN-RELATED
Paelopatides50250TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides50251
Paelopatides50252INACTIVE HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 1
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