The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50201 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
Paelopatides50202 | |
Paelopatides50203 | |
Paelopatides50204 | TELOMERE REPEATS-BINDING BOUQUET FORMATION PROTEIN 1 |
Paelopatides50206 | |
Paelopatides50208 | APOLIPOPROTEIN L |
Paelopatides50209 | PROTEIN CBG26694 |
Paelopatides50210 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides50211 | ZGC:195170 |
Paelopatides50212 | |
Paelopatides50213 | REVERSE TRANSCRIPTASES |
Paelopatides50214 | METHYLTHIOADENOSINE/PURINE NUCLEOSIDE PHOSPHORYLASE |
Paelopatides50215 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Paelopatides50216 | |
Paelopatides50217 | D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
Paelopatides50218 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
Paelopatides50219 | TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN |
Paelopatides50220 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
Paelopatides50221 | T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL |
Paelopatides50222 | |
Paelopatides50223 | PROTEIN CBG26694 |
Paelopatides50224 | PROTEIN CBG26694 |
Paelopatides50225 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Paelopatides50226 | ANTIGEN BSP, PUTATIVE-RELATED |
Paelopatides50227 | DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A |
Paelopatides50228 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50229 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50230 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50231 | |
Paelopatides50232 | |
Paelopatides50233 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides50234 | |
Paelopatides50235 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
Paelopatides50236 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
Paelopatides50237 | |
Paelopatides50238 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50239 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
Paelopatides50240 | ARYLSULFATASE |
Paelopatides50241 | |
Paelopatides50242 | |
Paelopatides50243 | |
Paelopatides50244 | GAG-RELATED PROTEIN |
Paelopatides50245 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50246 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
Paelopatides50247 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides50248 | |
Paelopatides50249 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides50250 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides50251 | |
Paelopatides50252 | INACTIVE HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 1 |