The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides50463 | ORGANIC ANION TRANSPORTER |
Paelopatides50464 | |
Paelopatides50465 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides50466 | F-BOX FAMILY PROTEIN |
Paelopatides50467 | |
Paelopatides50468 | PROTEIN CBG26694 |
Paelopatides50469 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides50470 | ZGC:172139 |
Paelopatides50471 | |
Paelopatides50472 | |
Paelopatides50473 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50474 | |
Paelopatides50475 | METALLOPHOSPHOESTERASE |
Paelopatides50476 | PROTEIN CBG26694 |
Paelopatides50477 | |
Paelopatides50478 | |
Paelopatides50479 | DNAJ-LIKE-2, ISOFORM A-RELATED |
Paelopatides50480 | ENDONUCLEASE-RELATED |
Paelopatides50481 | PROTEIN CBG26694 |
Paelopatides50482 | |
Paelopatides50483 | TAX1-BINDING PROTEIN 3-RELATED |
Paelopatides50484 | TAX1-BINDING PROTEIN 3-RELATED |
Paelopatides50485 | DNA TOPOISOMERASE/GYRASE |
Paelopatides50486 | |
Paelopatides50487 | UBIQUITIN-CONJUGATING ENZYME E2 |
Paelopatides50488 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50489 | ZGC:195170 |
Paelopatides50491 | PROTEIN CBG26694 |
Paelopatides50492 | |
Paelopatides50493 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides50494 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides50495 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides50496 | COILED-COIL DOMAIN-CONTAINING PROTEIN 15 |
Paelopatides50497 | TYROSINE-PROTEIN KINASE |
Paelopatides50498 | ACROSIN-RELATED |
Paelopatides50499 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides50500 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides50501 | |
Paelopatides50502 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides50503 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Paelopatides50504 | |
Paelopatides50505 | |
Paelopatides50506 | DULLARD PROTEIN PHOSPHATASE |
Paelopatides50507 | SOLUTE CARRIER FAMILY 13 MEMBER |
Paelopatides50508 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides50509 | |
Paelopatides50510 | |
Paelopatides50511 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides50512 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides50513 |