The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides50514 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50515 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides50516 | |
| Paelopatides50517 | BUCENTAUR RELATED |
| Paelopatides50518 | |
| Paelopatides50519 | BREAKPOINT CLUSTER REGION PROTEIN BCR |
| Paelopatides50520 | BREAKPOINT CLUSTER REGION PROTEIN BCR |
| Paelopatides50521 | |
| Paelopatides50522 | SUGAR TRANSPORTER |
| Paelopatides50523 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| Paelopatides50524 | |
| Paelopatides50525 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides50526 | |
| Paelopatides50527 | PTB-CONTAINING, CUBILIN AND LRP1-INTERACTING PROTEIN |
| Paelopatides50528 | |
| Paelopatides50529 | |
| Paelopatides50530 | |
| Paelopatides50531 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides50532 | |
| Paelopatides50533 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| Paelopatides50534 | ELYS PROTEIN |
| Paelopatides50535 | |
| Paelopatides50536 | NETRIN RECEPTOR UNC5 |
| Paelopatides50537 | MONOCARBOXYLATE TRANSPORTER |
| Paelopatides50538 | |
| Paelopatides50540 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| Paelopatides50541 | |
| Paelopatides50542 | NUCLEAR PORE GLYCOPROTEIN P62-RELATED |
| Paelopatides50543 | |
| Paelopatides50544 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides50545 | |
| Paelopatides50546 | PROTEIN CBG26694 |
| Paelopatides50547 | |
| Paelopatides50548 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides50549 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides50550 | |
| Paelopatides50551 | ATP7, ISOFORM B |
| Paelopatides50552 | |
| Paelopatides50553 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| Paelopatides50554 | |
| Paelopatides50555 | |
| Paelopatides50556 | |
| Paelopatides50557 | SLR5058 PROTEIN |
| Paelopatides50558 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides50559 | UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN |
| Paelopatides50560 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| Paelopatides50561 | PROTEIN CBG26694 |
| Paelopatides50562 | |
| Paelopatides50563 | |
| Paelopatides50564 |
