The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides50779 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50780 | |
| Paelopatides50781 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides50782 | EXPRESSED PROTEIN |
| Paelopatides50783 | |
| Paelopatides50784 | PROTEIN CBG26694 |
| Paelopatides50785 | PROTEIN CBG26694 |
| Paelopatides50786 | PROTEIN CBG26694 |
| Paelopatides50787 | BONUS, ISOFORM C-RELATED |
| Paelopatides50788 | SMALL NUCLEAR RIBONUCLEOPROTEIN F SNRNP-F |
| Paelopatides50789 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| Paelopatides50790 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Paelopatides50791 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides50792 | |
| Paelopatides50793 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides50794 | TESTOSTERONE-REGULATED PROTEIN RP2 |
| Paelopatides50795 | TESTOSTERONE-REGULATED PROTEIN RP2 |
| Paelopatides50796 | - |
| Paelopatides50797 | |
| Paelopatides50798 | SERINE PROTEASE INHIBITOR, SERPIN |
| Paelopatides50799 | |
| Paelopatides50800 | |
| Paelopatides50801 | |
| Paelopatides50802 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
| Paelopatides50803 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50804 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides50805 | |
| Paelopatides50806 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| Paelopatides50807 | REVERSE TRANSCRIPTASES |
| Paelopatides50808 | BASIGIN RELATED |
| Paelopatides50809 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides50810 | PRE-MRNA-PROCESSING FACTOR 17 |
| Paelopatides50811 | PRE-MRNA-PROCESSING FACTOR 17 |
| Paelopatides50812 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| Paelopatides50813 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50814 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| Paelopatides50815 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50816 | MEIOTIC CHECKPOINT REGULATOR TSG24 FAMILY MEMBER |
| Paelopatides50817 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50818 | |
| Paelopatides50819 | PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1 |
| Paelopatides50820 | |
| Paelopatides50821 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides50822 | CALMODULIN-LYSINE N-METHYLTRANSFERASE |
| Paelopatides50823 | |
| Paelopatides50824 | |
| Paelopatides50825 | ZGC:195170 |
| Paelopatides50826 | TNF RECEPTOR ASSOCIATED FACTOR |
| Paelopatides50827 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides50828 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
