The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides51037 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51038 | |
Paelopatides51039 | CALCIUM-TRANSPORTING ATPASE |
Paelopatides51040 | |
Paelopatides51041 | RIBONUCLEASE P_MRP PROTEIN SUBUNIT POP5 |
Paelopatides51042 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51043 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51044 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Paelopatides51045 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides51046 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51047 | FACIOGENITAL DYSPLASIA PROTEIN |
Paelopatides51048 | |
Paelopatides51049 | |
Paelopatides51050 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
Paelopatides51051 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
Paelopatides51052 | |
Paelopatides51053 | |
Paelopatides51054 | ACROSIN-RELATED |
Paelopatides51055 | G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN |
Paelopatides51056 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
Paelopatides51057 | RETROTRANSPOSON |
Paelopatides51058 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides51059 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides51060 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides51061 | |
Paelopatides51062 | DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL |
Paelopatides51063 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Paelopatides51064 | |
Paelopatides51065 | |
Paelopatides51066 | |
Paelopatides51067 | |
Paelopatides51068 | |
Paelopatides51069 | SLR5058 PROTEIN |
Paelopatides51070 | RETROTRANSPOSON |
Paelopatides51071 | RETROTRANSPOSON |
Paelopatides51072 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides51073 | |
Paelopatides51074 | OVOCHYMASE-RELATED |
Paelopatides51075 | BIFUNCTIONAL TH2 PROTEIN |
Paelopatides51076 | |
Paelopatides51077 | |
Paelopatides51078 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides51079 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides51080 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51081 | G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP |
Paelopatides51082 | |
Paelopatides51083 | G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP |
Paelopatides51084 | G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP |
Paelopatides51085 | G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP |
Paelopatides51086 |