About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51137INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS
Paelopatides51138
Paelopatides51139REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51140COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Paelopatides51141PARANEOPLASTIC ANTIGEN
Paelopatides51142PROTEIN CBG26694
Paelopatides51143-
Paelopatides51144
Paelopatides51145F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51147
Paelopatides51148POL PROTEIN
Paelopatides51149FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides51150PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51151GUANYL-NUCLEOTIDE EXCHANGE FACTOR
Paelopatides51152
Paelopatides51153
Paelopatides51154PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51155SCC1 / RAD21 FAMILY MEMBER
Paelopatides51156SCC1 / RAD21 FAMILY MEMBER
Paelopatides51157
Paelopatides51158TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN
Paelopatides51159
Paelopatides51160
Paelopatides51161REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51162TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
Paelopatides51163PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51164
Paelopatides51165
Paelopatides51166WSCD FAMILY MEMBER CG9164
Paelopatides51167PROTEIN CBG26694
Paelopatides51168BONUS, ISOFORM C-RELATED
Paelopatides51169
Paelopatides51170PROTEIN CBG26694
Paelopatides51171BETA-GALACTOSIDASE RELATED
Paelopatides51172BETA-GALACTOSIDASE RELATED
Paelopatides51173CARBONIC ANHYDRASE
Paelopatides51174-
Paelopatides51175ZNF44 PROTEIN
Paelopatides51176SYNOVIAL SARCOMA, X MEMBER
Paelopatides51177ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides51178PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides51179
Paelopatides51180REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51181PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides51182
Paelopatides51183ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides51184
Paelopatides51185
Paelopatides51186ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides51187ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
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