About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51291PROTEIN CBG26694
Paelopatides51292PROTEIN CBG26694
Paelopatides51293
Paelopatides51294PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1
Paelopatides51295REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51296SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides51297ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51298IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides51299SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides51300
Paelopatides51301CYTIDINE DEAMINASE
Paelopatides51302REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51303
Paelopatides51304
Paelopatides51305TRANSPOSON
Paelopatides51306
Paelopatides51307KINESIN-RELATED
Paelopatides51308CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51309CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides51310
Paelopatides51311-
Paelopatides51312
Paelopatides51313ZINC FINGER PROTEIN 200
Paelopatides51314DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
Paelopatides51315DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
Paelopatides51316
Paelopatides51317
Paelopatides51318ADULT RETINA PROTEIN
Paelopatides51319ADENOSINE/GUANOSINE DIPHOSPHATASE
Paelopatides51320BNIP1-RELATED
Paelopatides51321ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides51322ATP-DEPENDENT RNA HELICASE RHLE-RELATED
Paelopatides51323LYSYL OXIDASE-LIKE-RELATED
Paelopatides51324LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN
Paelopatides51325PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides51326SET DOMAIN PROTEINS
Paelopatides51327SET DOMAIN PROTEINS
Paelopatides51328MONOCARBOXYLATE TRANSPORTER
Paelopatides51329
Paelopatides51330
Paelopatides51331
Paelopatides51332SERINE/THREONINE-PROTEIN KINASE NEK
Paelopatides51333
Paelopatides51334DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT
Paelopatides51335DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT
Paelopatides51336
Paelopatides51337PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides51338RETROTRANSPOSON
Paelopatides51339TSEC-2-RELATED
Paelopatides51340CYTOCHROME C OXIDASE POLYPEPTIDE 7A
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