The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides51443 | |
| Paelopatides51444 | |
| Paelopatides51445 | HRAS-LIKE SUPPRESSOR - RELATED |
| Paelopatides51446 | AGAP008228-PA |
| Paelopatides51448 | |
| Paelopatides51449 | |
| Paelopatides51450 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51451 | REVERSE TRANSCRIPTASE |
| Paelopatides51452 | |
| Paelopatides51453 | |
| Paelopatides51454 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51455 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51456 | |
| Paelopatides51457 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| Paelopatides51458 | |
| Paelopatides51459 | |
| Paelopatides51460 | COLLAGEN ALPHA |
| Paelopatides51461 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51462 | |
| Paelopatides51463 | |
| Paelopatides51464 | |
| Paelopatides51465 | |
| Paelopatides51466 | VESICLE PROTEIN SORTING-ASSOCIATED |
| Paelopatides51467 | METHYLMALONYL-COA EPIMERASE |
| Paelopatides51468 | |
| Paelopatides51469 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides51470 | |
| Paelopatides51471 | |
| Paelopatides51472 | |
| Paelopatides51473 | |
| Paelopatides51474 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides51475 | PROTEIN CBG26694 |
| Paelopatides51476 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51481 | LEUCOKININ RECEPTOR-RELATED |
| Paelopatides51482 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51483 | GALACTOSE-3-O-SULFOTRANSFERASE |
| Paelopatides51484 | PARANEOPLASTIC ANTIGEN |
| Paelopatides51485 | |
| Paelopatides51486 | ENDONUCLEASE-RELATED |
| Paelopatides51487 | TUBULIN |
| Paelopatides51488 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| Paelopatides51489 | TRANSMEMBRANE PROTEIN 237 |
| Paelopatides51490 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51491 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51492 | |
| Paelopatides51493 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51494 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51495 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
| Paelopatides51496 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51497 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
