The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides51548 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| Paelopatides51549 | UNCHARACTERIZED |
| Paelopatides51550 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51551 | HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE |
| Paelopatides51552 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| Paelopatides51553 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides51554 | |
| Paelopatides51555 | |
| Paelopatides51556 | |
| Paelopatides51557 | |
| Paelopatides51558 | |
| Paelopatides51559 | TUBULIN |
| Paelopatides51560 | |
| Paelopatides51561 | UNCHARACTERIZED |
| Paelopatides51562 | UNCHARACTERIZED |
| Paelopatides51563 | |
| Paelopatides51564 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51565 | |
| Paelopatides51566 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides51567 | |
| Paelopatides51568 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Paelopatides51569 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Paelopatides51570 | TRANSPOSON |
| Paelopatides51571 | |
| Paelopatides51572 | RETROTRANSPOSON |
| Paelopatides51573 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51574 | |
| Paelopatides51575 | AP ENDONUCLEASE |
| Paelopatides51576 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| Paelopatides51577 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| Paelopatides51578 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| Paelopatides51579 | GAG-RELATED PROTEIN |
| Paelopatides51580 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
| Paelopatides51581 | NUCLEAR PROTEIN LOCALIZATION 4 |
| Paelopatides51582 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| Paelopatides51583 | |
| Paelopatides51584 | TOLL-LIKE RECEPTOR |
| Paelopatides51585 | TOLL-LIKE RECEPTOR |
| Paelopatides51586 | |
| Paelopatides51587 | NEUROTRANSMITTER GATED ION CHANNEL |
| Paelopatides51588 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides51589 | |
| Paelopatides51590 | |
| Paelopatides51591 | |
| Paelopatides51592 | |
| Paelopatides51593 | ZGC:195170 |
| Paelopatides51598 | |
| Paelopatides51599 | - |
| Paelopatides51600 | PARANEOPLASTIC ANTIGEN |
| Paelopatides51601 | POL PROTEIN |
