The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides51708 | |
| Paelopatides51709 | |
| Paelopatides51710 | |
| Paelopatides51711 | DYNEIN ASSEMBLY FACTOR 4, AXONEMAL |
| Paelopatides51712 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Paelopatides51713 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| Paelopatides51714 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| Paelopatides51715 | |
| Paelopatides51716 | |
| Paelopatides51721 | |
| Paelopatides51722 | ENDONUCLEASE-RELATED |
| Paelopatides51723 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides51724 | UDP/ADP-SUGAR PYROPHOSPHATASE |
| Paelopatides51725 | MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED |
| Paelopatides51726 | |
| Paelopatides51727 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| Paelopatides51728 | |
| Paelopatides51729 | |
| Paelopatides51730 | SULFATASE MODIFYING FACTOR 1, 2 |
| Paelopatides51731 | TRANSPOSON |
| Paelopatides51732 | PHYTOENE DEHYDROGENASE |
| Paelopatides51733 | 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER |
| Paelopatides51734 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides51735 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides51736 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51737 | |
| Paelopatides51738 | |
| Paelopatides51739 | CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING |
| Paelopatides51740 | PROTHROMBIN |
| Paelopatides51741 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51742 | |
| Paelopatides51743 | |
| Paelopatides51744 | |
| Paelopatides51745 | |
| Paelopatides51746 | |
| Paelopatides51747 | |
| Paelopatides51748 | HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1 |
| Paelopatides51749 | |
| Paelopatides51750 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51751 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51752 | UNC-13-4A, ISOFORM B |
| Paelopatides51753 | |
| Paelopatides51754 | AUTOCRINE PROLIFERATION REPRESSOR PROTEIN A |
| Paelopatides51755 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides51756 | |
| Paelopatides51757 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
| Paelopatides51758 | RB1-INDUCIBLE COILED-COIL |
| Paelopatides51759 | RB1-INDUCIBLE COILED-COIL |
| Paelopatides51760 | |
| Paelopatides51761 |
