The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides51812 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51813 | |
Paelopatides51814 | |
Paelopatides51815 | |
Paelopatides51816 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51817 | |
Paelopatides51818 | SERINE/THREONINE-PROTEIN KINASE |
Paelopatides51819 | NACHT DOMAIN-CONTAINING PROTEIN |
Paelopatides51820 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51821 | CATION CHANNEL SPERM-ASSOCIATED PROTEIN 3 |
Paelopatides51822 | ENDONUCLEASE-RELATED |
Paelopatides51823 | POL PROTEIN |
Paelopatides51824 | UNCHARACTERIZED |
Paelopatides51825 | PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P |
Paelopatides51826 | LEUCOKININ RECEPTOR-RELATED |
Paelopatides51827 | NEUROPEPTIDE S RECEPTOR |
Paelopatides51828 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 |
Paelopatides51829 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
Paelopatides51830 | |
Paelopatides51831 | PDZ AND LIM DOMAIN PROTEIN ZASP |
Paelopatides51832 | |
Paelopatides51833 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Paelopatides51834 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
Paelopatides51835 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51836 | PROTEIN MMS22-LIKE |
Paelopatides51837 | DRAB5-RELATED |
Paelopatides51838 | TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT |
Paelopatides51839 | CHAPERONIN |
Paelopatides51840 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
Paelopatides51842 | UNCHARACTERIZED |
Paelopatides51843 | |
Paelopatides51844 | LD33695P |
Paelopatides51845 | INTEGRIN BETA SUBUNIT |
Paelopatides51846 | |
Paelopatides51847 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides51848 | CYTOCHROME B561-RELATED |
Paelopatides51849 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 |
Paelopatides51852 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Paelopatides51853 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides51854 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides51856 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51857 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51860 | |
Paelopatides51861 | |
Paelopatides51862 | NXPE FAMILY MEMBER |
Paelopatides51863 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides51864 | |
Paelopatides51865 | CYSTEINE PROTEASE FAMILY C1-RELATED |
Paelopatides51866 | POL PROTEIN |
Paelopatides51867 | CYSTEINE PROTEASE FAMILY C1-RELATED |