The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides51762 | |
Paelopatides51763 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides51764 | |
Paelopatides51765 | |
Paelopatides51766 | |
Paelopatides51767 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51768 | |
Paelopatides51769 | |
Paelopatides51770 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
Paelopatides51771 | TUBULIN |
Paelopatides51772 | |
Paelopatides51773 | PROTEIN CBG26694 |
Paelopatides51774 | UNCHARACTERIZED |
Paelopatides51775 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides51776 | REVERSE TRANSCRIPTASES |
Paelopatides51777 | |
Paelopatides51778 | |
Paelopatides51779 | |
Paelopatides51780 | |
Paelopatides51781 | |
Paelopatides51782 | POL PROTEIN |
Paelopatides51783 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51784 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides51785 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51786 | POL PROTEIN |
Paelopatides51787 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides51788 | PROTEIN CBG26694 |
Paelopatides51789 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51790 | |
Paelopatides51791 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51792 | CYTOCHROME P450 FAMILY 3 |
Paelopatides51793 | CYTOCHROME P450 FAMILY 3 |
Paelopatides51794 | |
Paelopatides51795 | |
Paelopatides51796 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD2 |
Paelopatides51797 | HISTONE-LYSINE N-METHYLTRANSFERASE SETD2 |
Paelopatides51798 | |
Paelopatides51799 | |
Paelopatides51800 | |
Paelopatides51801 | CRUMBS FAMILY MEMBER |
Paelopatides51802 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51803 | BUCENTAUR RELATED |
Paelopatides51804 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51805 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
Paelopatides51806 | |
Paelopatides51807 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides51808 | UNCHARACTERIZED |
Paelopatides51809 | |
Paelopatides51810 | PEPTIDASE |
Paelopatides51811 | DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED |