The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides51498 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides51499 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides51500 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN |
Paelopatides51501 | CARBONIC ANHYDRASE |
Paelopatides51502 | |
Paelopatides51503 | |
Paelopatides51504 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51505 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51506 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51507 | PROTEIN CBG26694 |
Paelopatides51508 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides51509 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51510 | HUNTINGTON DISEASE PROTEIN |
Paelopatides51511 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides51512 | 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL |
Paelopatides51513 | MALARIA ANTIGEN-RELATED |
Paelopatides51514 | PROTEIN-TYROSINE SULFOTRANSFERASE 2 |
Paelopatides51515 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51516 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
Paelopatides51517 | |
Paelopatides51518 | |
Paelopatides51519 | GENETIC SUPPRESSOR ELEMENT 1 |
Paelopatides51520 | G-PROTEIN COUPLED RECEPTOR |
Paelopatides51521 | MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT |
Paelopatides51522 | MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT |
Paelopatides51523 | ACYL-COA THIOESTERASE |
Paelopatides51524 | ACYL-COA THIOESTERASE |
Paelopatides51525 | |
Paelopatides51526 | PROTEIN CBG26694 |
Paelopatides51527 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Paelopatides51528 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Paelopatides51529 | |
Paelopatides51530 | UNCHARACTERIZED |
Paelopatides51531 | |
Paelopatides51532 | - |
Paelopatides51533 | ACYL-COA SYNTHETASE |
Paelopatides51534 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51535 | |
Paelopatides51536 | |
Paelopatides51537 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Paelopatides51538 | DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER |
Paelopatides51539 | YIPPEE DOMAIN-CONTAINING PROTEIN |
Paelopatides51540 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51541 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57 |
Paelopatides51542 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51543 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides51544 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides51545 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
Paelopatides51546 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides51547 | SERINE PROTEASE INHIBITOR |