About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides51341CYTOCHROME C OXIDASE POLYPEPTIDE 7A
Paelopatides51342ANKYRIN REPEAT AND EF-HAND DOMAIN-CONTAINING PROTEIN 1
Paelopatides51343MENIN
Paelopatides51344MENIN
Paelopatides51345E3 UBIQUITIN-PROTEIN LIGASE RNF8
Paelopatides51346CLE
Paelopatides51347
Paelopatides51348
Paelopatides51349
Paelopatides51350BCL-2 RELATED
Paelopatides51351
Paelopatides51352GLUTAMATE--TRNA LIGASE
Paelopatides51353UNCHARACTERIZED
Paelopatides51354
Paelopatides51355ZINC FINGER PROTEIN
Paelopatides51356FI24210P1
Paelopatides51357REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51358GALACTOSE-3-O-SULFOTRANSFERASE
Paelopatides51359REVERSE TRANSCRIPTASES
Paelopatides51360MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
Paelopatides51361REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51362MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
Paelopatides51363ROTATIN
Paelopatides51364ROTATIN
Paelopatides51365CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
Paelopatides51366REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51367BETA-LACTAMASE-RELATED
Paelopatides51368REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51369BETA-LACTAMASE-RELATED
Paelopatides51370NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides51371ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides51372EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides51373
Paelopatides51374
Paelopatides51375PROTEIN LIN-28
Paelopatides51376SH3 MULTIPLE DOMAIN
Paelopatides51377PHYTANOYL-COA ALPHA-HYDROXYLASE
Paelopatides51378
Paelopatides51379
Paelopatides51381
Paelopatides51382REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides51383PROTEIN CBG26694
Paelopatides51384
Paelopatides51385SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Paelopatides51386UNCHARACTERIZED
Paelopatides51387HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Paelopatides51388DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Paelopatides51389PROTEIN CBG26694
Paelopatides51390DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Paelopatides51391ARMADILLO-LIKE HELICAL DOMAIN-CONTAINING PROTEIN 2
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