The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides51972 | |
| Paelopatides51973 | |
| Paelopatides51974 | CALCIUM-BINDING PROTEIN 8-RELATED |
| Paelopatides51975 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides51976 | PROTEIN CBG26694 |
| Paelopatides51977 | UNCHARACTERIZED |
| Paelopatides51978 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51979 | |
| Paelopatides51980 | PROTEIN CBG26694 |
| Paelopatides51981 | |
| Paelopatides51982 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51983 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides51984 | RING FINGER AND KH DOMAIN CONTAINING PROTEIN 1 |
| Paelopatides51985 | |
| Paelopatides51986 | METHYL-CPG BINDING PROTEIN, MBD |
| Paelopatides51987 | |
| Paelopatides51988 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides51989 | KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING |
| Paelopatides51990 | RIBONUCLEASE H2 SUBUNIT B |
| Paelopatides51991 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3 |
| Paelopatides51992 | CENTROMERE PROTEIN I |
| Paelopatides51993 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides51994 | |
| Paelopatides51995 | |
| Paelopatides51996 | PROTEIN CBG26694 |
| Paelopatides51997 | PROTEIN CBG26694 |
| Paelopatides51998 | PROTEIN CBG26694 |
| Paelopatides51999 | PROTEIN CBG26694 |
| Paelopatides52000 | PROTEIN CBG26694 |
| Paelopatides52001 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides52002 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides52003 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides52004 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides52005 | |
| Paelopatides52006 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| Paelopatides52007 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| Paelopatides52008 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides52009 | |
| Paelopatides52010 | |
| Paelopatides52012 | |
| Paelopatides52013 | |
| Paelopatides52014 | FRIZZLED |
| Paelopatides52015 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides52016 | UNCHARACTERIZED |
| Paelopatides52017 | UNCHARACTERIZED |
| Paelopatides52018 | |
| Paelopatides52019 | ACETYL-COA C-ACYLTRANSFERASE |
| Paelopatides52020 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52021 | OS05G0170800 PROTEIN |
| Paelopatides52022 | F-BOX PROTEIN SKIP16 |
