The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides52154 | SIKE FAMILY MEMBER |
| Paelopatides52155 | VOLTAGE-GATED POTASSIUM CHANNEL |
| Paelopatides52157 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| Paelopatides52158 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| Paelopatides52159 | UBIQUITIN-CONJUGATING ENZYME E2 |
| Paelopatides52160 | |
| Paelopatides52161 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides52162 | |
| Paelopatides52163 | CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE |
| Paelopatides52164 | CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE |
| Paelopatides52165 | |
| Paelopatides52166 | |
| Paelopatides52167 | |
| Paelopatides52168 | |
| Paelopatides52169 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| Paelopatides52170 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| Paelopatides52171 | - |
| Paelopatides52172 | SULFOTRANSFERASE SULT |
| Paelopatides52173 | CARBONYL REDUCTASE 1-RELATED |
| Paelopatides52174 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52175 | RHO FAMILY GTPASE |
| Paelopatides52176 | NUCLEOPORIN AMO1-LIKE |
| Paelopatides52177 | DNA2/NAM7 HELICASE FAMILY |
| Paelopatides52178 | |
| Paelopatides52179 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides52180 | SULFOTRANSFERASE SULT |
| Paelopatides52181 | SULFOTRANSFERASE SULT |
| Paelopatides52182 | |
| Paelopatides52183 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52184 | PROTEIN CBG26694 |
| Paelopatides52185 | |
| Paelopatides52186 | |
| Paelopatides52187 | |
| Paelopatides52188 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides52189 | |
| Paelopatides52190 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| Paelopatides52192 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| Paelopatides52193 | RIBONUCLEASE P PROTEIN SUBUNIT P20 |
| Paelopatides52194 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
| Paelopatides52195 | |
| Paelopatides52196 | ANTIGEN BSP, PUTATIVE-RELATED |
| Paelopatides52197 | INTEGRATOR COMPLEX SUBUNIT 3 |
| Paelopatides52198 | PROTEIN CBG26694 |
| Paelopatides52199 | |
| Paelopatides52200 | OVOCHYMASE-RELATED |
| Paelopatides52201 | PEPTIDASE S8 |
| Paelopatides52202 | 26S PROTEASOME REGULATORY SUBUNIT |
| Paelopatides52203 | 26S PROTEASOME REGULATORY SUBUNIT |
| Paelopatides52204 | PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE |
| Paelopatides52205 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
