The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides52023 | BCL7 RELATED |
Paelopatides52024 | OXIDASE/PEROXIDASE |
Paelopatides52025 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52026 | PROTEIN CBG26694 |
Paelopatides52027 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
Paelopatides52028 | SI:CH211-196P9.1-RELATED |
Paelopatides52029 | RAP1 GTPASE-GDP DISSOCIATION STIMULATOR 1 |
Paelopatides52030 | NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 |
Paelopatides52031 | NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 |
Paelopatides52032 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides52033 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides52034 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides52035 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52036 | CHARGED MULTIVESICULAR BODY PROTEIN |
Paelopatides52037 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides52038 | |
Paelopatides52039 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52040 | |
Paelopatides52041 | BONUS, ISOFORM C-RELATED |
Paelopatides52042 | BONUS, ISOFORM C-RELATED |
Paelopatides52043 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52044 | |
Paelopatides52045 | |
Paelopatides52046 | BASIGIN RELATED |
Paelopatides52047 | TRANSPOSABLE ELEMENT-RELATED |
Paelopatides52048 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52049 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides52050 | EXPRESSED PROTEIN |
Paelopatides52051 | TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 |
Paelopatides52052 | |
Paelopatides52053 | |
Paelopatides52054 | REVERSE TRANSCRIPTASES |
Paelopatides52055 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
Paelopatides52056 | |
Paelopatides52057 | |
Paelopatides52058 | MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 |
Paelopatides52059 | GRB10 INTERACTING GYF PROTEIN |
Paelopatides52060 | FORKHEAD BOX PROTEIN J2 FAMILY MEMBER |
Paelopatides52061 | FORKHEAD BOX PROTEIN J2 FAMILY MEMBER |
Paelopatides52062 | TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 |
Paelopatides52063 | TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 |
Paelopatides52064 | TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11 |
Paelopatides52065 | 4.1 G PROTEIN |
Paelopatides52066 | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING |
Paelopatides52067 | |
Paelopatides52068 | |
Paelopatides52069 | FAM98 |
Paelopatides52070 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52071 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52072 | EG:EG0003.4 PROTEIN-RELATED |