The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides52073 | EG:EG0003.4 PROTEIN-RELATED |
Paelopatides52074 | |
Paelopatides52075 | |
Paelopatides52076 | MITOCHONDRIAL RIBOSOMAL PROTEIN L24 |
Paelopatides52077 | PYGOPUS |
Paelopatides52078 | AMMONIUM TRANSPORTER |
Paelopatides52079 | ANTIGEN 332, DBL-LIKE PROTEIN-RELATED |
Paelopatides52080 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
Paelopatides52081 | |
Paelopatides52082 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides52083 | TORSIN |
Paelopatides52113 | IP01054P |
Paelopatides52115 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides52116 | ATP-BINDING CASSETTE SUB-FAMILY B |
Paelopatides52117 | GROWTH HORMONE-INDUCIBLE SOLUBLE PROTEIN-RELATED |
Paelopatides52118 | AGAP005574-PA |
Paelopatides52119 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides52120 | ENDONUCLEASE-RELATED |
Paelopatides52121 | ZGC:195170 |
Paelopatides52122 | PROTEIN B, PUTATIVE-RELATED-RELATED |
Paelopatides52123 | COFILIN-RELATED |
Paelopatides52124 | |
Paelopatides52125 | |
Paelopatides52126 | |
Paelopatides52127 | |
Paelopatides52128 | |
Paelopatides52129 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides52130 | |
Paelopatides52131 | ENDONUCLEASE-RELATED |
Paelopatides52132 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides52133 | ENDONUCLEASE-RELATED |
Paelopatides52134 | ENDONUCLEASE-RELATED |
Paelopatides52135 | |
Paelopatides52136 | IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG |
Paelopatides52137 | |
Paelopatides52138 | RIBOSOMAL PROTEIN L13 |
Paelopatides52139 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
Paelopatides52141 | |
Paelopatides52142 | |
Paelopatides52143 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides52144 | PROTEIN CBG26694 |
Paelopatides52145 | |
Paelopatides52146 | GLUCOSYLCERAMIDASE |
Paelopatides52147 | |
Paelopatides52148 | |
Paelopatides52149 | RETROTRANSPOSON |
Paelopatides52150 | |
Paelopatides52151 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides52152 | |
Paelopatides52153 | FORKHEAD BOX PROTEIN |