The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides52257 | |
| Paelopatides52258 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52259 | ANKYRIN REPEAT-CONTAINING |
| Paelopatides52260 | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED |
| Paelopatides52261 | |
| Paelopatides52262 | |
| Paelopatides52263 | |
| Paelopatides52264 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52265 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| Paelopatides52266 | ETS |
| Paelopatides52267 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52268 | CYTOCHROME P450 FAMILY 3 |
| Paelopatides52269 | |
| Paelopatides52270 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides52271 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides52272 | |
| Paelopatides52273 | |
| Paelopatides52274 | ATP-DEPENDENT DNA HELICASE |
| Paelopatides52275 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides52276 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
| Paelopatides52277 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides52278 | |
| Paelopatides52279 | |
| Paelopatides52280 | |
| Paelopatides52281 | |
| Paelopatides52282 | |
| Paelopatides52283 | |
| Paelopatides52284 | |
| Paelopatides52285 | |
| Paelopatides52286 | |
| Paelopatides52287 | TRANSCRIPTION INITIATION FACTOR TFIID |
| Paelopatides52288 | |
| Paelopatides52289 | SOLUTE CARRIER FAMILY 22 MEMBER |
| Paelopatides52290 | NUCLEOBINDIN |
| Paelopatides52291 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| Paelopatides52292 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52293 | CYTOCHROME P450 FAMILY 46 SUBFAMILY A |
| Paelopatides52294 | NEPHRIN |
| Paelopatides52295 | |
| Paelopatides52296 | KINESIN-LIKE PROTEIN KLP-3 |
| Paelopatides52297 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52298 | |
| Paelopatides52299 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52300 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52301 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| Paelopatides52302 | |
| Paelopatides52303 | |
| Paelopatides52304 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides52305 | REVERSE TRANSCRIPTASES |
| Paelopatides52306 | BUCENTAUR RELATED |
