About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52416-
Paelopatides52417GPI-ANCHOR TRANSAMIDASE
Paelopatides52418REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52431
Paelopatides52432
Paelopatides52433
Paelopatides52434
Paelopatides52435REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52436OS05G0424000 PROTEIN-RELATED
Paelopatides52437EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 10
Paelopatides52438VINCULIN
Paelopatides52439CNH DOMAIN CONTAINING
Paelopatides52440SOLUTE CARRIER FAMILY 35
Paelopatides52441REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides52442VEZATIN
Paelopatides52443D123 PROTEIN
Paelopatides52444
Paelopatides52445LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides52446URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
Paelopatides52447VESICLE PROTEIN SORTING-ASSOCIATED
Paelopatides52448DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
Paelopatides52449IP13529P
Paelopatides52450PROTEIN CBG26694
Paelopatides52451PROTEIN CBG26694
Paelopatides52452ENZYMATIC POLYPROTEIN-RELATED
Paelopatides52453ENDONUCLEASE-RELATED
Paelopatides52454PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides52455REVERSE TRANSCRIPTASES
Paelopatides52457
Paelopatides52458CXXC-TYPE ZINC FINGER PROTEIN 1
Paelopatides52459UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Paelopatides52460
Paelopatides52461
Paelopatides52462REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides524632-5 OLIGOADENYLATE SYNTHETASE
Paelopatides52464ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides52477
Paelopatides52478TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Paelopatides52479
Paelopatides52480
Paelopatides52482BUCENTAUR RELATED
Paelopatides52484FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides52485
Paelopatides52486FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52487FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52488FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52489
Paelopatides52492MYOSIN HEAVY CHAIN, NON-MUSCLE
Paelopatides52493
Paelopatides52494
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