About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides52596ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Paelopatides52597TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides52598PROTEIN EVA-1
Paelopatides52599ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides52600ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides52601PROTEIN CBG26694
Paelopatides52602
Paelopatides52603FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides52604EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides52605NOTCH LIGAND FAMILY MEMBER
Paelopatides52606UNCHARACTERIZED
Paelopatides52607REVERSE TRANSCRIPTASES
Paelopatides52608EGF-LIKE DOMAIN-CONTAINING PROTEIN
Paelopatides52609CRUMBS FAMILY MEMBER
Paelopatides52610CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52611CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52612RAS-RELATED GTP BINDING RAG/GTR YEAST
Paelopatides52613
Paelopatides52614
Paelopatides52615MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE
Paelopatides52616
Paelopatides52617DYNEIN HEAVY CHAIN
Paelopatides52618
Paelopatides52619
Paelopatides52620
Paelopatides52621ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides52622
Paelopatides52623
Paelopatides52624
Paelopatides52625
Paelopatides52626
Paelopatides52627UNCHARACTERIZED
Paelopatides52628PROTEIN CBG26694
Paelopatides52629LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51
Paelopatides52630ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides52631ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides52632ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides52633ADHESION G PROTEIN-COUPLED RECEPTOR G7
Paelopatides52635
Paelopatides52636PROTEIN CBG26694
Paelopatides52637DIABETES AND OBESITY REGULATED, ISOFORM G
Paelopatides52638ZGC:162297
Paelopatides52639GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Paelopatides52640UNCHARACTERIZED
Paelopatides52641DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1
Paelopatides52642HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY
Paelopatides52643TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides52644CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides52649-
Paelopatides52650REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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